Search Genes

Gene : shmt1 - ENSACLG00000010356 - Astatotilapia calliptera (Eastern happy)

General information

Expressed in liver and 7 other cell types or tissues.

Gene identifier

ENSACLG00000010356

Name

shmt1

Description

serine hydroxymethyltransferase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-040426-1558]

Organism

Astatotilapia calliptera (Eastern happy)

Synonym(s)

Orthologs

52 orthologs

Paralogs

3 paralogs

Source data

Retrieve all processed expression values for that gene

Expression graph

80%

Expression table

80%

Reported absence of expression

80%

Orthologs

Filter:

Taxon Name	Species with orthologs	Gene(s)	Expression comparison
Pseudocrenilabrinae	1 species Neolamprologus brichardi (Fairy cichlid)	1 gene ENSNBRG00000003899 shmt1	Compare expression
Ovalentaria	4 species Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Neolamprologus brichardi (Fairy cichlid) Nothobranchius furzeri (Turquoise killifish)	4 genes ENSPREG00000018149 shmt1 ENSORLG00000013776 shmt1 ENSNBRG00000003899 shmt1 ENSNFUG00015003312 shmt1	Compare expression
Percomorphaceae	6 species Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish)	6 genes ENSPREG00000018149 shmt1 ENSORLG00000013776 shmt1 ENSNBRG00000003899 shmt1 ENSSMAG00000006361 shmt1 ENSGACG00000007764 shmt1 ENSNFUG00015003312 shmt1	Compare expression
Euteleosteomorpha	8 species Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish)	8 genes ENSELUG00000011924 shmt1 ENSSSAG00000058709 shmt1 ENSPREG00000018149 shmt1 ENSORLG00000013776 shmt1 ENSNBRG00000003899 shmt1 ENSSMAG00000006361 shmt1 ENSGACG00000007764 shmt1 ENSNFUG00015003312 shmt1	Compare expression
Clupeocephala	10 species Danio rerio (zebrafish) Astyanax mexicanus (Blind cave fish) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish)	10 genes ENSDARG00000052816 shmt1 ENSAMXG00000010173 shmt1 ENSELUG00000011924 shmt1 ENSSSAG00000058709 shmt1 ENSPREG00000018149 shmt1 ENSORLG00000013776 shmt1 ENSNBRG00000003899 shmt1 ENSSMAG00000006361 shmt1 ENSGACG00000007764 shmt1 ENSNFUG00015003312 shmt1	Compare expression
Teleostei	11 species Danio rerio (zebrafish) Anguilla anguilla (European freshwater eel) Astyanax mexicanus (Blind cave fish) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish)	11 genes ENSDARG00000052816 shmt1 118216481 shmt1 ENSAMXG00000010173 shmt1 ENSELUG00000011924 shmt1 ENSSSAG00000058709 shmt1 ENSPREG00000018149 shmt1 ENSORLG00000013776 shmt1 ENSNBRG00000003899 shmt1 ENSSMAG00000006361 shmt1 ENSGACG00000007764 shmt1 ENSNFUG00015003312 shmt1	Compare expression
Neopterygii	12 species Danio rerio (zebrafish) Lepisosteus oculatus (Spotted gar) Anguilla anguilla (European freshwater eel) Astyanax mexicanus (Blind cave fish) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish)	12 genes ENSDARG00000052816 shmt1 ENSLOCG00000004890 shmt1 118216481 shmt1 ENSAMXG00000010173 shmt1 ENSELUG00000011924 shmt1 ENSSSAG00000058709 shmt1 ENSPREG00000018149 shmt1 ENSORLG00000013776 shmt1 ENSNBRG00000003899 shmt1 ENSSMAG00000006361 shmt1 ENSGACG00000007764 shmt1 ENSNFUG00015003312 shmt1	Compare expression
Euteleostomi	44 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Canis lupus familiaris (dog) Felis catus (cat) Equus caballus (horse) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig) Gallus gallus (chicken) Meleagris gallopavo (Wild turkey) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Monodelphis domestica (opossum) Xenopus laevis (African clawed frog) Xenopus tropicalis (western clawed frog) Anolis carolinensis (green anole) Lepisosteus oculatus (Spotted gar) Anguilla anguilla (European freshwater eel) Astyanax mexicanus (Blind cave fish) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish) Latimeria chalumnae (Coelacanth)	47 genes ENSG00000176974 SHMT1 ENSMUSG00000020534 Shmt1 ENSDARG00000052816 shmt1 ENSCAFG00000018253 SHMT1 ENSFCAG00000015421 SHMT1 ENSECAG00000015690 SHMT1 ENSSSCG00000036208 SHMT1 ENSBTAG00000017094 SHMT1 ENSCHIG00000013438 SHMT1 ENSOARG00000018548 SHMT1 ENSOCUG00000021541 SHMT1 ENSCPOG00000004585 SHMT1 ENSGALG00000005046 SHMT1 ENSMGAG00000004925 SHMT1 ENSOANG00000009875 SHMT1 ENSCJAG00000001063 SHMT1 ENSCATG00000006264 SHMT1 ENSMFAG00000034627 SHMT1 ENSMFAG00000037557 ENSMMUG00000013535 SHMT1 ENSMNEG00000041772 ENSMNEG00000044262 SHMT1 ENSPANG00000023671 SHMT1 ENSGGOG00000003097 SHMT1 ENSPPAG00000029976 SHMT1 ENSPPAG00000039710 ENSPTRG00000008851 SHMT1 ENSMICG00000012800 SHMT1 ENSCSAG00000008040 SHMT1 108395479 SHMT1 ENSRNOG00000005275 Shmt1 ENSMODG00000013682 SHMT1 380048 shmt1.L ENSXETG00000005754 shmt1 ENSACAG00000009076 SHMT1 ENSLOCG00000004890 shmt1 118216481 shmt1 ENSAMXG00000010173 shmt1 ENSELUG00000011924 shmt1 ENSSSAG00000058709 shmt1 ENSPREG00000018149 shmt1 ENSORLG00000013776 shmt1 ENSNBRG00000003899 shmt1 ENSSMAG00000006361 shmt1 ENSGACG00000007764 shmt1 ENSNFUG00015003312 shmt1 ENSLACG00000009822 SHMT1	Compare expression
Chordata	45 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Canis lupus familiaris (dog) Felis catus (cat) Equus caballus (horse) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig) Gallus gallus (chicken) Meleagris gallopavo (Wild turkey) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Monodelphis domestica (opossum) Xenopus laevis (African clawed frog) Xenopus tropicalis (western clawed frog) Anolis carolinensis (green anole) Lepisosteus oculatus (Spotted gar) Anguilla anguilla (European freshwater eel) Astyanax mexicanus (Blind cave fish) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish) Branchiostoma lanceolatum (Common lancelet) Latimeria chalumnae (Coelacanth)	48 genes ENSG00000176974 SHMT1 ENSMUSG00000020534 Shmt1 ENSDARG00000052816 shmt1 ENSCAFG00000018253 SHMT1 ENSFCAG00000015421 SHMT1 ENSECAG00000015690 SHMT1 ENSSSCG00000036208 SHMT1 ENSBTAG00000017094 SHMT1 ENSCHIG00000013438 SHMT1 ENSOARG00000018548 SHMT1 ENSOCUG00000021541 SHMT1 ENSCPOG00000004585 SHMT1 ENSGALG00000005046 SHMT1 ENSMGAG00000004925 SHMT1 ENSOANG00000009875 SHMT1 ENSCJAG00000001063 SHMT1 ENSCATG00000006264 SHMT1 ENSMFAG00000034627 SHMT1 ENSMFAG00000037557 ENSMMUG00000013535 SHMT1 ENSMNEG00000041772 ENSMNEG00000044262 SHMT1 ENSPANG00000023671 SHMT1 ENSGGOG00000003097 SHMT1 ENSPPAG00000029976 SHMT1 ENSPPAG00000039710 ENSPTRG00000008851 SHMT1 ENSMICG00000012800 SHMT1 ENSCSAG00000008040 SHMT1 108395479 SHMT1 ENSRNOG00000005275 Shmt1 ENSMODG00000013682 SHMT1 380048 shmt1.L ENSXETG00000005754 shmt1 ENSACAG00000009076 SHMT1 ENSLOCG00000004890 shmt1 118216481 shmt1 ENSAMXG00000010173 shmt1 ENSELUG00000011924 shmt1 ENSSSAG00000058709 shmt1 ENSPREG00000018149 shmt1 ENSORLG00000013776 shmt1 ENSNBRG00000003899 shmt1 ENSSMAG00000006361 shmt1 ENSGACG00000007764 shmt1 ENSNFUG00015003312 shmt1 BL11261 SHMT1 ENSLACG00000009822 SHMT1	Compare expression
Bilateria	49 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Drosophila melanogaster (fruit fly) Caenorhabditis elegans (nematode) Canis lupus familiaris (dog) Felis catus (cat) Equus caballus (horse) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig) Gallus gallus (chicken) Meleagris gallopavo (Wild turkey) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Monodelphis domestica (opossum) Xenopus laevis (African clawed frog) Xenopus tropicalis (western clawed frog) Anolis carolinensis (green anole) Lepisosteus oculatus (Spotted gar) Anguilla anguilla (European freshwater eel) Astyanax mexicanus (Blind cave fish) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish) Branchiostoma lanceolatum (Common lancelet) Latimeria chalumnae (Coelacanth) Drosophila pseudoobscura () Drosophila simulans ()	52 genes ENSG00000176974 SHMT1 ENSMUSG00000020534 Shmt1 ENSDARG00000052816 shmt1 FBgn0029823 Shmt WBGene00003214 mel-32 ENSCAFG00000018253 SHMT1 ENSFCAG00000015421 SHMT1 ENSECAG00000015690 SHMT1 ENSSSCG00000036208 SHMT1 ENSBTAG00000017094 SHMT1 ENSCHIG00000013438 SHMT1 ENSOARG00000018548 SHMT1 ENSOCUG00000021541 SHMT1 ENSCPOG00000004585 SHMT1 ENSGALG00000005046 SHMT1 ENSMGAG00000004925 SHMT1 ENSOANG00000009875 SHMT1 ENSCJAG00000001063 SHMT1 ENSCATG00000006264 SHMT1 ENSMFAG00000034627 SHMT1 ENSMFAG00000037557 ENSMMUG00000013535 SHMT1 ENSMNEG00000041772 ENSMNEG00000044262 SHMT1 ENSPANG00000023671 SHMT1 ENSGGOG00000003097 SHMT1 ENSPPAG00000029976 SHMT1 ENSPPAG00000039710 ENSPTRG00000008851 SHMT1 ENSMICG00000012800 SHMT1 ENSCSAG00000008040 SHMT1 108395479 SHMT1 ENSRNOG00000005275 Shmt1 ENSMODG00000013682 SHMT1 380048 shmt1.L ENSXETG00000005754 shmt1 ENSACAG00000009076 SHMT1 ENSLOCG00000004890 shmt1 118216481 shmt1 ENSAMXG00000010173 shmt1 ENSELUG00000011924 shmt1 ENSSSAG00000058709 shmt1 ENSPREG00000018149 shmt1 ENSORLG00000013776 shmt1 ENSNBRG00000003899 shmt1 ENSSMAG00000006361 shmt1 ENSGACG00000007764 shmt1 ENSNFUG00015003312 shmt1 BL11261 SHMT1 ENSLACG00000009822 SHMT1 FBgn0075674 Dpse\GA15657 FBgn0187851 Dsim\GD16224	Compare expression

Showing 1 to 10 of 10 entries

Orthology information comes from OMA : ENSACLG00000010356.

Paralogs (same species)

Filter:

Taxon Name	Gene(s)	Expression comparison	See details
Bilateria	3 genes ENSACLG00000018445 shmt2 ENSACLG00000019281 shmt2 ENSACLG00000021738 SHMT2	Compare expression: table \| graph

Showing 1 to 1 of 1 entries

Paralogy information comes from OMA : ENSACLG00000010356.

Cross-references

Ensembl

ENSACLG00000010356 (shmt1)

ZFIN

ZDB-GENE-040426-1558 (shmt1)

UniProtKB/TrEMBL

A0A3P8PDW6,A0A3P8PDW6_ASTCA,A0A3P8PDX7,A0A3P8PDX7_ASTCA