Bgee Documentation
Gene Search and Gene Page
How to search for a gene and the information you can get from the Bgee gene page.
TopAnat: an Anatomical Entity (Uberon) Enrichment Tool
How to use TopAnat and to identify anatomical entities that have over or under-represented gene expression.
Search for Present/Absent Expression Calls
How to search gene expression calls in the Bgee database.
Data Curation in Bgee
Background on data curation including what data are captured, relevant ontologies, and how data is integrated across species.
Querying the Bgee Knowledge Graph with SPARQL
How to query the Bgee Knowledge Graph with SPARQL.
Expression Pattern Comparison
Compare gene expression across anatomical structures for a list of genes.
Search Experiments, Data Annotations, and Processed Expression Values
How to search and filter experiments, curated annotations, and processed expression values in the Bgee database.
Anatomical Homology
How to retrieve anatomical entities that are homologous among different species.
Expression Calls Files
Detailed description of the contents and generation of the presence/absence expression calls download files.
Processed Expression Values File
Detailed description of the contents and generation of the processed expression and annotation metadata download files.
Expression Graph
How to interpret and use the expression graph.