Search Genes

Gene : lsm6 - ENSDARG00000036995 - Danio rerio (zebrafish)

General information

Expressed in testis and 28 other cell types or tissues.

Gene identifier

ENSDARG00000036995

Name

lsm6

Description

LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040625-50]

Organism

Danio rerio (zebrafish)

Synonym(s)

zgc:92379

Orthologs

49 orthologs

Paralogs

2 paralogs

Source data

Retrieve all processed expression values for that gene

Expression graph

80%

Expression table

80%

Reported absence of expression

80%

Orthologs

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Taxon Name	Species with orthologs	Gene(s)	Expression comparison
Clupeocephala	9 species Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish)	10 genes ENSELUG00000014301 LSM6 ENSSSAG00000074461 LSM6 ENSSSAG00000075714 LSM6 ENSGMOG00000015550 lsm6 ENSPREG00000023235 lsm6 ENSACLG00000025621 lsm6 ENSNBRG00000004887 lsm6 ENSSMAG00000004550 lsm6 ENSGACG00000017223 lsm6 ENSNFUG00015002878 LSM6	Compare expression
Teleostei	10 species Anguilla anguilla (European freshwater eel) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish)	11 genes 118228430 lsm6 ENSELUG00000014301 LSM6 ENSSSAG00000074461 LSM6 ENSSSAG00000075714 LSM6 ENSGMOG00000015550 lsm6 ENSPREG00000023235 lsm6 ENSACLG00000025621 lsm6 ENSNBRG00000004887 lsm6 ENSSMAG00000004550 lsm6 ENSGACG00000017223 lsm6 ENSNFUG00015002878 LSM6	Compare expression
Neopterygii	11 species Lepisosteus oculatus (Spotted gar) Anguilla anguilla (European freshwater eel) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish)	13 genes ENSLOCG00000008852 lsm6 ENSLOCG00000017683 lsm6 118228430 lsm6 ENSELUG00000014301 LSM6 ENSSSAG00000074461 LSM6 ENSSSAG00000075714 LSM6 ENSGMOG00000015550 lsm6 ENSPREG00000023235 lsm6 ENSACLG00000025621 lsm6 ENSNBRG00000004887 lsm6 ENSSMAG00000004550 lsm6 ENSGACG00000017223 lsm6 ENSNFUG00015002878 LSM6	Compare expression
Euteleostomi	39 species Homo sapiens (human) Mus musculus (mouse) Canis lupus familiaris (dog) Felis catus (cat) Equus caballus (horse) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Cavia porcellus (guinea pig) Gallus gallus (chicken) Meleagris gallopavo (Wild turkey) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Monodelphis domestica (opossum) Anolis carolinensis (green anole) Lepisosteus oculatus (Spotted gar) Anguilla anguilla (European freshwater eel) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish) Latimeria chalumnae (Coelacanth)	44 genes ENSG00000164167 LSM6 ENSMUSG00000031683 Lsm6 ENSCAFG00000007738 LSM6 ENSFCAG00000003047 LSM6 ENSECAG00000021036 LSM6 ENSSSCG00000035973 LSM6 ENSBTAG00000014060 LSM6 ENSCHIG00000010334 LSM6 ENSCHIG00000012864 ENSCHIG00000024198 ENSOARG00000008509 LSM6 ENSOARG00000011641 ENSCPOG00000032655 LSM6 ENSGALG00000009985 LSM6 ENSMGAG00000003802 LSM6 ENSOANG00000045062 LSM6 ENSCJAG00000002482 LSM6 ENSCATG00000002770 LSM6 ENSMFAG00000033073 LSM6 ENSMMUG00000057637 LSM6 ENSMNEG00000034820 LSM6 ENSPANG00000006552 LSM6 ENSGGOG00000001310 LSM6 ENSPPAG00000037929 LSM6 ENSPTRG00000016488 LSM6 ENSCSAG00000003421 LSM6 108409001 LSM6 ENSRNOG00000030374 LOC100360750 ENSMODG00000039383 LSM6 ENSACAG00000004004 LSM6 ENSLOCG00000008852 lsm6 ENSLOCG00000017683 lsm6 118228430 lsm6 ENSELUG00000014301 LSM6 ENSSSAG00000074461 LSM6 ENSSSAG00000075714 LSM6 ENSGMOG00000015550 lsm6 ENSPREG00000023235 lsm6 ENSACLG00000025621 lsm6 ENSNBRG00000004887 lsm6 ENSSMAG00000004550 lsm6 ENSGACG00000017223 lsm6 ENSNFUG00015002878 LSM6 ENSLACG00000006937 LSM6	Compare expression
Chordata	40 species Homo sapiens (human) Mus musculus (mouse) Canis lupus familiaris (dog) Felis catus (cat) Equus caballus (horse) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Cavia porcellus (guinea pig) Gallus gallus (chicken) Meleagris gallopavo (Wild turkey) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Monodelphis domestica (opossum) Anolis carolinensis (green anole) Lepisosteus oculatus (Spotted gar) Anguilla anguilla (European freshwater eel) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish) Branchiostoma lanceolatum (Common lancelet) Latimeria chalumnae (Coelacanth)	45 genes ENSG00000164167 LSM6 ENSMUSG00000031683 Lsm6 ENSCAFG00000007738 LSM6 ENSFCAG00000003047 LSM6 ENSECAG00000021036 LSM6 ENSSSCG00000035973 LSM6 ENSBTAG00000014060 LSM6 ENSCHIG00000010334 LSM6 ENSCHIG00000012864 ENSCHIG00000024198 ENSOARG00000008509 LSM6 ENSOARG00000011641 ENSCPOG00000032655 LSM6 ENSGALG00000009985 LSM6 ENSMGAG00000003802 LSM6 ENSOANG00000045062 LSM6 ENSCJAG00000002482 LSM6 ENSCATG00000002770 LSM6 ENSMFAG00000033073 LSM6 ENSMMUG00000057637 LSM6 ENSMNEG00000034820 LSM6 ENSPANG00000006552 LSM6 ENSGGOG00000001310 LSM6 ENSPPAG00000037929 LSM6 ENSPTRG00000016488 LSM6 ENSCSAG00000003421 LSM6 108409001 LSM6 ENSRNOG00000030374 LOC100360750 ENSMODG00000039383 LSM6 ENSACAG00000004004 LSM6 ENSLOCG00000008852 lsm6 ENSLOCG00000017683 lsm6 118228430 lsm6 ENSELUG00000014301 LSM6 ENSSSAG00000074461 LSM6 ENSSSAG00000075714 LSM6 ENSGMOG00000015550 lsm6 ENSPREG00000023235 lsm6 ENSACLG00000025621 lsm6 ENSNBRG00000004887 lsm6 ENSSMAG00000004550 lsm6 ENSGACG00000017223 lsm6 ENSNFUG00015002878 LSM6 BL18688 LSM6 ENSLACG00000006937 LSM6	Compare expression
Bilateria	44 species Homo sapiens (human) Mus musculus (mouse) Drosophila melanogaster (fruit fly) Caenorhabditis elegans (nematode) Canis lupus familiaris (dog) Felis catus (cat) Equus caballus (horse) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Cavia porcellus (guinea pig) Gallus gallus (chicken) Meleagris gallopavo (Wild turkey) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Monodelphis domestica (opossum) Anolis carolinensis (green anole) Lepisosteus oculatus (Spotted gar) Anguilla anguilla (European freshwater eel) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish) Branchiostoma lanceolatum (Common lancelet) Latimeria chalumnae (Coelacanth) Drosophila pseudoobscura () Drosophila simulans ()	49 genes ENSG00000164167 LSM6 ENSMUSG00000031683 Lsm6 FBgn0034564 CG9344 WBGene00003080 lsm-6 ENSCAFG00000007738 LSM6 ENSFCAG00000003047 LSM6 ENSECAG00000021036 LSM6 ENSSSCG00000035973 LSM6 ENSBTAG00000014060 LSM6 ENSCHIG00000010334 LSM6 ENSCHIG00000012864 ENSCHIG00000024198 ENSOARG00000008509 LSM6 ENSOARG00000011641 ENSCPOG00000032655 LSM6 ENSGALG00000009985 LSM6 ENSMGAG00000003802 LSM6 ENSOANG00000045062 LSM6 ENSCJAG00000002482 LSM6 ENSCATG00000002770 LSM6 ENSMFAG00000033073 LSM6 ENSMMUG00000057637 LSM6 ENSMNEG00000034820 LSM6 ENSPANG00000006552 LSM6 ENSGGOG00000001310 LSM6 ENSPPAG00000037929 LSM6 ENSPTRG00000016488 LSM6 ENSCSAG00000003421 LSM6 108409001 LSM6 ENSRNOG00000030374 LOC100360750 ENSMODG00000039383 LSM6 ENSACAG00000004004 LSM6 ENSLOCG00000008852 lsm6 ENSLOCG00000017683 lsm6 118228430 lsm6 ENSELUG00000014301 LSM6 ENSSSAG00000074461 LSM6 ENSSSAG00000075714 LSM6 ENSGMOG00000015550 lsm6 ENSPREG00000023235 lsm6 ENSACLG00000025621 lsm6 ENSNBRG00000004887 lsm6 ENSSMAG00000004550 lsm6 ENSGACG00000017223 lsm6 ENSNFUG00015002878 LSM6 BL18688 LSM6 ENSLACG00000006937 LSM6 FBgn0081701 Dpse\GA21716 FBgn0183292 Dsim\GD11551	Compare expression

Showing 1 to 6 of 6 entries

Orthology information comes from OMA : ENSDARG00000036995.

Paralogs (same species)

Filter:

Taxon Name	Gene(s)	Expression comparison	See details
Metazoa	2 genes ENSDARG00000105037 snrpf ENSDARG00000113461 CR855334.1	Compare expression: table \| graph

Showing 1 to 1 of 1 entries

Paralogy information comes from OMA : ENSDARG00000036995.

Cross-references

Ensembl

ENSDARG00000036995 (lsm6)

ZFIN

ZDB-GENE-040625-50 (lsm6)

EMBL

BC072549,BC164231,BX324156

UniProtKB/TrEMBL

Q6IMW9,Q6IMW9_DANRE