Search Genes

Gene : smc1a - ENSDARG00000055754 - Danio rerio (zebrafish)

General information

Expressed in brain and 10 other cell types or tissues.

Gene identifier

ENSDARG00000055754

Name

smc1a

Description

structural maintenance of chromosomes 1A [Source:ZFIN;Acc:ZDB-GENE-090506-9]

Organism

Danio rerio (zebrafish)

Synonym(s)

sb:eu719

Orthologs

46 orthologs

Paralogs

235 paralogs

Source data

Retrieve all processed expression values for that gene

Expression graph

80%

Expression table

80%

Reported absence of expression

80%

Orthologs

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Taxon Name	Species with orthologs	Gene(s)	Expression comparison
Otophysi	1 species Astyanax mexicanus (Blind cave fish)	1 gene ENSAMXG00000013136 smc1a	Compare expression
Clupeocephala	11 species Astyanax mexicanus (Blind cave fish) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish)	12 genes ENSAMXG00000013136 smc1a ENSELUG00000009461 smc1al ENSSSAG00000006452 SMC1A ENSSSAG00000064516 smc1al ENSGMOG00000008344 smc1al ENSPREG00000021702 smc1al ENSORLG00000007360 smc1al ENSACLG00000004712 smc1al ENSNBRG00000015949 smc1al ENSSMAG00000002013 smc1al ENSGACG00000008848 smc1al ENSNFUG00015006519 smc1al	Compare expression
Teleostei	12 species Anguilla anguilla (European freshwater eel) Astyanax mexicanus (Blind cave fish) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish)	13 genes 118207774 smc1a ENSAMXG00000013136 smc1a ENSELUG00000009461 smc1al ENSSSAG00000006452 SMC1A ENSSSAG00000064516 smc1al ENSGMOG00000008344 smc1al ENSPREG00000021702 smc1al ENSORLG00000007360 smc1al ENSACLG00000004712 smc1al ENSNBRG00000015949 smc1al ENSSMAG00000002013 smc1al ENSGACG00000008848 smc1al ENSNFUG00015006519 smc1al	Compare expression
Euteleostomi	39 species Homo sapiens (human) Mus musculus (mouse) Canis lupus familiaris (dog) Felis catus (cat) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Cavia porcellus (guinea pig) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Monodelphis domestica (opossum) Xenopus laevis (African clawed frog) Xenopus tropicalis (western clawed frog) Anguilla anguilla (European freshwater eel) Astyanax mexicanus (Blind cave fish) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish) Latimeria chalumnae (Coelacanth)	41 genes ENSG00000072501 SMC1A ENSMUSG00000041133 Smc1a ENSCAFG00000016241 SMC1A ENSFCAG00000013897 SMC1A ENSSSCG00000012325 SMC1A ENSBTAG00000017761 SMC1A ENSCHIG00000008648 SMC1A ENSOARG00000008581 SMC1A ENSCPOG00000009577 SMC1A ENSOANG00000009211 SMC1A ENSCJAG00000005985 SMC1A ENSCATG00000038498 SMC1A ENSMFAG00000003859 SMC1A ENSMMUG00000009293 SMC1A ENSMNEG00000029158 SMC1A ENSPANG00000015373 SMC1A ENSGGOG00000004321 SMC1A ENSPPAG00000042217 SMC1A ENSPTRG00000021927 SMC1A ENSMICG00000014444 SMC1A ENSCSAG00000012563 SMC1A 108407870 SMC1A ENSRNOG00000003139 Smc1a ENSMODG00000016607 SMC1A 108699983 smc1a.S 380182 smc1a.L ENSXETG00000024747 smc1a 118207774 smc1a ENSAMXG00000013136 smc1a ENSELUG00000009461 smc1al ENSSSAG00000006452 SMC1A ENSSSAG00000064516 smc1al ENSGMOG00000008344 smc1al ENSPREG00000021702 smc1al ENSORLG00000007360 smc1al ENSACLG00000004712 smc1al ENSNBRG00000015949 smc1al ENSSMAG00000002013 smc1al ENSGACG00000008848 smc1al ENSNFUG00015006519 smc1al ENSLACG00000000861 SMC1A	Compare expression
Chordata	40 species Homo sapiens (human) Mus musculus (mouse) Canis lupus familiaris (dog) Felis catus (cat) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Cavia porcellus (guinea pig) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Monodelphis domestica (opossum) Xenopus laevis (African clawed frog) Xenopus tropicalis (western clawed frog) Anguilla anguilla (European freshwater eel) Astyanax mexicanus (Blind cave fish) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish) Branchiostoma lanceolatum (Common lancelet) Latimeria chalumnae (Coelacanth)	42 genes ENSG00000072501 SMC1A ENSMUSG00000041133 Smc1a ENSCAFG00000016241 SMC1A ENSFCAG00000013897 SMC1A ENSSSCG00000012325 SMC1A ENSBTAG00000017761 SMC1A ENSCHIG00000008648 SMC1A ENSOARG00000008581 SMC1A ENSCPOG00000009577 SMC1A ENSOANG00000009211 SMC1A ENSCJAG00000005985 SMC1A ENSCATG00000038498 SMC1A ENSMFAG00000003859 SMC1A ENSMMUG00000009293 SMC1A ENSMNEG00000029158 SMC1A ENSPANG00000015373 SMC1A ENSGGOG00000004321 SMC1A ENSPPAG00000042217 SMC1A ENSPTRG00000021927 SMC1A ENSMICG00000014444 SMC1A ENSCSAG00000012563 SMC1A 108407870 SMC1A ENSRNOG00000003139 Smc1a ENSMODG00000016607 SMC1A 108699983 smc1a.S 380182 smc1a.L ENSXETG00000024747 smc1a 118207774 smc1a ENSAMXG00000013136 smc1a ENSELUG00000009461 smc1al ENSSSAG00000006452 SMC1A ENSSSAG00000064516 smc1al ENSGMOG00000008344 smc1al ENSPREG00000021702 smc1al ENSORLG00000007360 smc1al ENSACLG00000004712 smc1al ENSNBRG00000015949 smc1al ENSSMAG00000002013 smc1al ENSGACG00000008848 smc1al ENSNFUG00015006519 smc1al BL08495 ENSG00000269384 ENSLACG00000000861 SMC1A	Compare expression
Bilateria	44 species Homo sapiens (human) Mus musculus (mouse) Drosophila melanogaster (fruit fly) Caenorhabditis elegans (nematode) Canis lupus familiaris (dog) Felis catus (cat) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Cavia porcellus (guinea pig) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Monodelphis domestica (opossum) Xenopus laevis (African clawed frog) Xenopus tropicalis (western clawed frog) Anguilla anguilla (European freshwater eel) Astyanax mexicanus (Blind cave fish) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish) Branchiostoma lanceolatum (Common lancelet) Latimeria chalumnae (Coelacanth) Drosophila pseudoobscura () Drosophila simulans ()	46 genes ENSG00000072501 SMC1A ENSMUSG00000041133 Smc1a FBgn0040283 SMC1 WBGene00001860 him-1 ENSCAFG00000016241 SMC1A ENSFCAG00000013897 SMC1A ENSSSCG00000012325 SMC1A ENSBTAG00000017761 SMC1A ENSCHIG00000008648 SMC1A ENSOARG00000008581 SMC1A ENSCPOG00000009577 SMC1A ENSOANG00000009211 SMC1A ENSCJAG00000005985 SMC1A ENSCATG00000038498 SMC1A ENSMFAG00000003859 SMC1A ENSMMUG00000009293 SMC1A ENSMNEG00000029158 SMC1A ENSPANG00000015373 SMC1A ENSGGOG00000004321 SMC1A ENSPPAG00000042217 SMC1A ENSPTRG00000021927 SMC1A ENSMICG00000014444 SMC1A ENSCSAG00000012563 SMC1A 108407870 SMC1A ENSRNOG00000003139 Smc1a ENSMODG00000016607 SMC1A 108699983 smc1a.S 380182 smc1a.L ENSXETG00000024747 smc1a 118207774 smc1a ENSAMXG00000013136 smc1a ENSELUG00000009461 smc1al ENSSSAG00000006452 SMC1A ENSSSAG00000064516 smc1al ENSGMOG00000008344 smc1al ENSPREG00000021702 smc1al ENSORLG00000007360 smc1al ENSACLG00000004712 smc1al ENSNBRG00000015949 smc1al ENSSMAG00000002013 smc1al ENSGACG00000008848 smc1al ENSNFUG00015006519 smc1al BL08495 ENSG00000269384 ENSLACG00000000861 SMC1A FBgn0079325 Dpse\GA19328 FBgn0192517 Dsim\GD21062	Compare expression

Showing 1 to 6 of 6 entries

Orthology information comes from OMA : ENSDARG00000055754.

Paralogs (same species)

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Taxon Name	Gene(s)	Expression comparison
Clupeocephala	1 gene ENSDARG00000058203 smc1al	Compare expression: table \| graph
Metazoa	2 genes ENSDARG00000014402 smc1b ENSDARG00000058203 smc1al	Compare expression: table \| graph
Opisthokonta	235 genes ENSDARG00000000857 mapk14a ENSDARG00000001578 echs1 ENSDARG00000001969 txlng ENSDARG00000002131 celf2 ENSDARG00000002168 tra2b ENSDARG00000002635 FAM184A ENSDARG00000002710 ncl ENSDARG00000003022 limk1b ENSDARG00000003867 cdk20 ENSDARG00000004581 sel1l ENSDARG00000004794 ccdc146 ENSDARG00000005098 zgc:86764 ENSDARG00000005104 limk2 ENSDARG00000005315 celf1 ENSDARG00000005916 srpk3 ENSDARG00000005980 sfswap ENSDARG00000005993 prc1b ENSDARG00000006174 lrrc23 ENSDARG00000006283 waslb ENSDARG00000006409 mapk12b ENSDARG00000007135 cnot3a ENSDARG00000007863 tra2a ENSDARG00000008906 si:ch211-241e1.5 ENSDARG00000009023 ankrd28b ENSDARG00000009525 tial1 ENSDARG00000009740 ppp1r7 ENSDARG00000009753 sf3b6 ENSDARG00000009870 mapk8b ENSDARG00000010603 kctd9b ENSDARG00000011020 hnrnpa1a ENSDARG00000011407 col2a1b ENSDARG00000012135 fbxl2 ENSDARG00000012405 col1a1a ENSDARG00000013025 ints6 ENSDARG00000013351 cirbpb ENSDARG00000013729 srsf6a ENSDARG00000014081 fam184a ENSDARG00000014113 wasla ENSDARG00000014366 luc7l3 ENSDARG00000014402 smc1b ENSDARG00000015068 txk ENSDARG00000015149 wasa ENSDARG00000015681 gsk3ab ENSDARG00000015853 rnps1 ENSDARG00000016496 cdk8 ENSDARG00000016783 srsf6b ENSDARG00000017329 cdkl1 ENSDARG00000017617 alg6 ENSDARG00000017708 lrrc40 ENSDARG00000017803 gsk3ba ENSDARG00000017842 syvn1 ENSDARG00000017901 tln2a ENSDARG00000017931 ints6l ENSDARG00000018241 mfap1 ENSDARG00000018319 arglu1b ENSDARG00000018476 pak2b ENSDARG00000018574 sf3b4 ENSDARG00000019130 plk2b ENSDARG00000019223 arglu1a ENSDARG00000019765 zgc:158803 ENSDARG00000019842 cnot3b ENSDARG00000020001 rad23aa ENSDARG00000020007 col1a2 ENSDARG00000021209 kctd9a ENSDARG00000021550 rad23b ENSDARG00000023578 lpp ENSDARG00000025332 rbm28 ENSDARG00000025397 srsf3a ENSDARG00000026028 ankrd44 ENSDARG00000026350 wasb ENSDARG00000026476 tia1l ENSDARG00000026577 cdk2 ENSDARG00000027552 mapk1 ENSDARG00000027734 srsf5b ENSDARG00000028469 rps6ka2 ENSDARG00000028721 mapk14b ENSDARG00000029501 gsk3aa ENSDARG00000029818 srsf5a ENSDARG00000030262 si:ch211-220i18.4 ENSDARG00000030634 pimr189 ENSDARG00000030665 CU929230.1 ENSDARG00000031293 dnajc9 ENSDARG00000031560 srpk1b ENSDARG00000031678 col5a2a ENSDARG00000031888 mapk8a ENSDARG00000033437 rps6ka1 ENSDARG00000033501 zgc:64189 ENSDARG00000034256 cdk10 ENSDARG00000035325 srsf7a ENSDARG00000035556 rps6ka3a ENSDARG00000035809 col1a1b ENSDARG00000036675 hnrnpa1b ENSDARG00000036826 ankrd52a ENSDARG00000037574 rps6kal ENSDARG00000037777 stk16 ENSDARG00000038695 elavl1a ENSDARG00000038754 plk3 ENSDARG00000039062 morn4 ENSDARG00000040732 elavl2 ENSDARG00000040853 shoc2 ENSDARG00000040985 itgbl1 ENSDARG00000041350 ankrd39 ENSDARG00000042021 mapk12a ENSDARG00000043134 cux1b ENSDARG00000043550 ENKD1 ENSDARG00000043858 cdk19 ENSDARG00000044436 rps6ka4 ENSDARG00000044811 cdk9 ENSDARG00000045639 elavl4 ENSDARG00000045836 mapk11 ENSDARG00000051916 cdk7 ENSDARG00000052468 gsk3bb ENSDARG00000052536 tia1 ENSDARG00000052677 si:ch211-138g9.2 ENSDARG00000052923 zgc:113162 ENSDARG00000053431 si:ch211-257p13.3 ENSDARG00000055683 pimr191 ENSDARG00000055903 luc7l ENSDARG00000056683 cdk5 ENSDARG00000057927 rps6ka3b ENSDARG00000058203 smc1al ENSDARG00000058346 sass6 ENSDARG00000058381 zgc:171775 ENSDARG00000058467 prpf40a ENSDARG00000058470 mapk13 ENSDARG00000058471 plk1 ENSDARG00000058984 rad23ab ENSDARG00000059351 hnrnpa3 ENSDARG00000059360 srsf3b ENSDARG00000060169 mns1 ENSDARG00000060551 rps6ka5 ENSDARG00000062235 lrrc34 ENSDARG00000068103 cfap45 ENSDARG00000068177 pak2a ENSDARG00000068190 pimr188 ENSDARG00000069093 col2a1a ENSDARG00000069270 si:dkey-182i3.11 ENSDARG00000070108 dek ENSDARG00000070127 nfxl1 ENSDARG00000070228 cdk6 ENSDARG00000070431 fip1l1b ENSDARG00000070573 mapk3 ENSDARG00000070600 dyrk3 ENSDARG00000071360 morn2 ENSDARG00000073997 srpk1a ENSDARG00000074121 dnmbp ENSDARG00000074546 si:ch211-213a13.2 ENSDARG00000075380 kri1 ENSDARG00000075567 fbxl20 ENSDARG00000075733 zyx ENSDARG00000077068 si:ch211-11p18.6 ENSDARG00000077364 mapk9 ENSDARG00000077732 alyref ENSDARG00000077928 ccdc173 ENSDARG00000078520 ikbip ENSDARG00000086326 CABZ01071939.1 ENSDARG00000087554 cdk1 ENSDARG00000087757 pimr190 ENSDARG00000087937 cdk4 ENSDARG00000089513 si:ch211-198e20.10 ENSDARG00000090752 plk2a ENSDARG00000091760 cwf19l2 ENSDARG00000091783 si:dkeyp-71f10.5 ENSDARG00000092758 caiap ENSDARG00000093154 pimr83 ENSDARG00000095086 cfdp1 ENSDARG00000097653 si:dkey-23k10.3 ENSDARG00000097753 slirp ENSDARG00000098365 lrrc74b ENSDARG00000098662 si:ch73-359m17.9 ENSDARG00000098822 tcerg1a ENSDARG00000099075 CABZ01032982.1 ENSDARG00000099733 CIR1 ENSDARG00000099898 si:ch211-27e6.1 ENSDARG00000100188 rnps1 ENSDARG00000100672 FQ311920.1 ENSDARG00000100729 tln1 ENSDARG00000100815 srsf3a ENSDARG00000100918 prc1a ENSDARG00000101057 srsf7b ENSDARG00000101299 CABZ01064248.1 ENSDARG00000101431 gas8 ENSDARG00000101583 CU927920.1 ENSDARG00000101744 elavl1b ENSDARG00000102412 eci2 ENSDARG00000102546 cdk11b ENSDARG00000102730 mapk10 ENSDARG00000102959 zgc:171220 ENSDARG00000103149 cog6 ENSDARG00000103443 vwde ENSDARG00000103467 limk1a ENSDARG00000103672 cirbpa ENSDARG00000103959 pak1 ENSDARG00000104110 col4a2 ENSDARG00000105041 CABZ01024659.1 ENSDARG00000105249 si:dkey-65b13.9 ENSDARG00000105457 si:cabz01021066.1 ENSDARG00000105522 si:ch211-196f2.3 ENSDARG00000109827 tia1l ENSDARG00000109970 rps6ka3b ENSDARG00000110143 BX324164.5 ENSDARG00000110174 cfdp1 ENSDARG00000110267 celf2 ENSDARG00000110333 cdk8 ENSDARG00000110705 srsf7a ENSDARG00000110726 BX649211.1 ENSDARG00000110835 mns1 ENSDARG00000110840 cdk1 ENSDARG00000111202 col2a1a ENSDARG00000111402 plk2b ENSDARG00000111440 pimr194 ENSDARG00000111590 cdk9 ENSDARG00000111745 plk1 ENSDARG00000111915 mapk1 ENSDARG00000111989 dnajc9 ENSDARG00000112058 shoc2 ENSDARG00000112185 ankrd52a ENSDARG00000112364 pabpc1l ENSDARG00000112397 mapk14a ENSDARG00000112826 CABZ01058107.1 ENSDARG00000113206 pimr85 ENSDARG00000113629 wasla ENSDARG00000113903 ints6l ENSDARG00000114470 zgc:171775 ENSDARG00000114478 tia1 ENSDARG00000115056 pimr192 ENSDARG00000115099 rps6kal ENSDARG00000115471 wasla ENSDARG00000115625 dyrk3 ENSDARG00000116113 col1a1a ENSDARG00000116467 CR626962.3 ENSDARG00000116564 shoc2 ENSDARG00000116641 rps6ka3a ENSDARG00000116743 rnps1 ENSDARG00000116973 srpk1a	Compare expression: table \| graph