Search Genes

Gene : rpf1 - ENSDARG00000112347 - Danio rerio (zebrafish)

General information

Gene identifier

ENSDARG00000112347

Name

rpf1

Description

ribosome production factor 1 homolog [Source:NCBI gene;Acc:415250]

Organism

Danio rerio (zebrafish)

Synonym(s)

bxdc5,zgc:86604

Orthologs

50 orthologs

Paralogs

2 paralogs

Source data

Retrieve all processed expression values for that gene

Expression graph

80%

Expression table

80%

Reported absence of expression

80%

Orthologs

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Taxon Name	Species with orthologs	Gene(s)	Expression comparison
Clupeocephala	9 species Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish)	9 genes ENSELUG00000001464 rpf1 ENSSSAG00000059443 rpf1 ENSGMOG00000016281 rpf1 ENSPREG00000014542 rpf1 ENSORLG00000006245 rpf1 ENSACLG00000001707 rpf1 ENSNBRG00000018350 rpf1 ENSGACG00000009686 rpf1 ENSNFUG00015025377 RPF1	Compare expression
Teleostei	10 species Anguilla anguilla (European freshwater eel) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish)	10 genes 118225324 rpf1 ENSELUG00000001464 rpf1 ENSSSAG00000059443 rpf1 ENSGMOG00000016281 rpf1 ENSPREG00000014542 rpf1 ENSORLG00000006245 rpf1 ENSACLG00000001707 rpf1 ENSNBRG00000018350 rpf1 ENSGACG00000009686 rpf1 ENSNFUG00015025377 RPF1	Compare expression
Neopterygii	11 species Lepisosteus oculatus (Spotted gar) Anguilla anguilla (European freshwater eel) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish)	11 genes ENSLOCG00000010053 rpf1 118225324 rpf1 ENSELUG00000001464 rpf1 ENSSSAG00000059443 rpf1 ENSGMOG00000016281 rpf1 ENSPREG00000014542 rpf1 ENSORLG00000006245 rpf1 ENSACLG00000001707 rpf1 ENSNBRG00000018350 rpf1 ENSGACG00000009686 rpf1 ENSNFUG00015025377 RPF1	Compare expression
Euteleostomi	42 species Homo sapiens (human) Mus musculus (mouse) Canis lupus familiaris (dog) Felis catus (cat) Equus caballus (horse) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig) Gallus gallus (chicken) Meleagris gallopavo (Wild turkey) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Monodelphis domestica (opossum) Xenopus laevis (African clawed frog) Xenopus tropicalis (western clawed frog) Anolis carolinensis (green anole) Lepisosteus oculatus (Spotted gar) Anguilla anguilla (European freshwater eel) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish) Latimeria chalumnae (Coelacanth)	46 genes ENSG00000117133 RPF1 ENSMUSG00000028187 Rpf1 ENSCAFG00000020311 RPF1 ENSFCAG00000025546 RPF1 ENSECAG00000019661 RPF1 ENSSSCG00000022145 RPF1 ENSBTAG00000008118 RPF1 ENSCHIG00000006618 LOC108636538 ENSCHIG00000012566 RPF1 ENSOARG00000013867 RPF1 ENSOCUG00000014803 ENSCPOG00000014316 RPF1 ENSGALG00000008796 RPF1 ENSMGAG00000009207 RPF1 ENSOANG00000043157 RPF1 ENSCJAG00000007400 RPF1 ENSCATG00000010531 RPF1 ENSMFAG00000003788 RPF1 ENSMNEG00000029462 RPF1 ENSPANG00000010052 RPF1 ENSGGOG00000015862 RPF1 ENSPPAG00000038610 RPF1 ENSPTRG00000000901 RPF1 ENSMICG00000003093 ENSMICG00000015146 ENSCSAG00000001417 ENSCSAG00000018855 108386579 RPF1 ENSRNOG00000015969 Rpf1 ENSMODG00000000452 RPF1 379964 rpf1 446740 rpf1.L ENSXETG00000008642 rpf1 ENSACAG00000005753 RPF1 ENSLOCG00000010053 rpf1 118225324 rpf1 ENSELUG00000001464 rpf1 ENSSSAG00000059443 rpf1 ENSGMOG00000016281 rpf1 ENSPREG00000014542 rpf1 ENSORLG00000006245 rpf1 ENSACLG00000001707 rpf1 ENSNBRG00000018350 rpf1 ENSGACG00000009686 rpf1 ENSNFUG00015025377 RPF1 ENSLACG00000014263 RPF1	Compare expression
Bilateria	46 species Homo sapiens (human) Mus musculus (mouse) Drosophila melanogaster (fruit fly) Caenorhabditis elegans (nematode) Canis lupus familiaris (dog) Felis catus (cat) Equus caballus (horse) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig) Gallus gallus (chicken) Meleagris gallopavo (Wild turkey) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Monodelphis domestica (opossum) Xenopus laevis (African clawed frog) Xenopus tropicalis (western clawed frog) Anolis carolinensis (green anole) Lepisosteus oculatus (Spotted gar) Anguilla anguilla (European freshwater eel) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish) Latimeria chalumnae (Coelacanth) Drosophila pseudoobscura () Drosophila simulans ()	50 genes ENSG00000117133 RPF1 ENSMUSG00000028187 Rpf1 FBgn0032408 CG6712 WBGene00009711 F44G4.1 ENSCAFG00000020311 RPF1 ENSFCAG00000025546 RPF1 ENSECAG00000019661 RPF1 ENSSSCG00000022145 RPF1 ENSBTAG00000008118 RPF1 ENSCHIG00000006618 LOC108636538 ENSCHIG00000012566 RPF1 ENSOARG00000013867 RPF1 ENSOCUG00000014803 ENSCPOG00000014316 RPF1 ENSGALG00000008796 RPF1 ENSMGAG00000009207 RPF1 ENSOANG00000043157 RPF1 ENSCJAG00000007400 RPF1 ENSCATG00000010531 RPF1 ENSMFAG00000003788 RPF1 ENSMNEG00000029462 RPF1 ENSPANG00000010052 RPF1 ENSGGOG00000015862 RPF1 ENSPPAG00000038610 RPF1 ENSPTRG00000000901 RPF1 ENSMICG00000003093 ENSMICG00000015146 ENSCSAG00000001417 ENSCSAG00000018855 108386579 RPF1 ENSRNOG00000015969 Rpf1 ENSMODG00000000452 RPF1 379964 rpf1 446740 rpf1.L ENSXETG00000008642 rpf1 ENSACAG00000005753 RPF1 ENSLOCG00000010053 rpf1 118225324 rpf1 ENSELUG00000001464 rpf1 ENSSSAG00000059443 rpf1 ENSGMOG00000016281 rpf1 ENSPREG00000014542 rpf1 ENSORLG00000006245 rpf1 ENSACLG00000001707 rpf1 ENSNBRG00000018350 rpf1 ENSGACG00000009686 rpf1 ENSNFUG00015025377 RPF1 ENSLACG00000014263 RPF1 FBgn0079800 Dpse\GA19804 FBgn0193540 Dsim\GD22130	Compare expression

Showing 1 to 5 of 5 entries

Orthology information comes from OMA : ENSDARG00000112347.

Paralogs (same species)

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Taxon Name	Gene(s)	Expression comparison	See details
Danio	2 genes ENSDARG00000005738 rpf1 ENSDARG00000115372 rpf1	Compare expression: table \| graph

Showing 1 to 1 of 1 entries

Paralogy information comes from OMA : ENSDARG00000112347.

Cross-references

Ensembl

ENSDARG00000112347 (rpf1)

ZFIN

ZDB-GENE-040625-177 (rpf1)

EMBL

CR854846

UniProtKB/TrEMBL

A0A2R8QE46,A0A2R8QE46_DANRE,A0A2R8QH88,A0A2R8QH88_DANRE