Oryzias latipes

Gene : si:ch211-13k12.2 - ENSORLG00000008312 - Oryzias latipes (Japanese rice fish)

General information

Expressed in pharyngeal gill and 15 other cell types or tissues.

Gene identifier

ENSORLG00000008312

Name

si:ch211-13k12.2

Description

RNA polymerase II elongation factor ELL [Source:NCBI gene;Acc:101159914]

Synonym(s)

Orthologs

Paralogs

Expression graph

80%

Expression table

80%

Reported absence of expression

80%

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Atherinomorphae

1 species

1 gene

ENSPREG00000006598 si:ch211-13k12.2
Compare expression
Ovalentaria

3 species

3 genes

ENSPREG00000006598 si:ch211-13k12.2
ENSACLG00000021171 si:ch211-13k12.2
ENSNBRG00000020167 si:ch211-13k12.2
Compare expression
Percomorphaceae

5 species

Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)

5 genes

ENSPREG00000006598 si:ch211-13k12.2
ENSACLG00000021171 si:ch211-13k12.2
ENSNBRG00000020167 si:ch211-13k12.2
ENSSMAG00000001611 si:ch211-13k12.2
ENSGACG00000010775 si:ch211-13k12.2
Compare expression
Acanthomorphata

6 species

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)

6 genes

ENSGMOG00000013055 si:ch211-13k12.2
ENSPREG00000006598 si:ch211-13k12.2
ENSACLG00000021171 si:ch211-13k12.2
ENSNBRG00000020167 si:ch211-13k12.2
ENSSMAG00000001611 si:ch211-13k12.2
ENSGACG00000010775 si:ch211-13k12.2
Compare expression
Euteleosteomorpha

8 species

Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)

9 genes

ENSELUG00000019537 si:ch211-13k12.2
ENSSSAG00000051864 si:ch211-13k12.2
ENSSSAG00000078749 si:ch211-13k12.2
ENSGMOG00000013055 si:ch211-13k12.2
ENSPREG00000006598 si:ch211-13k12.2
ENSACLG00000021171 si:ch211-13k12.2
ENSNBRG00000020167 si:ch211-13k12.2
ENSSMAG00000001611 si:ch211-13k12.2
ENSGACG00000010775 si:ch211-13k12.2
Compare expression
Clupeocephala

10 species

Danio rerio (zebrafish)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)

11 genes

ENSDARG00000038121 si:ch211-13k12.2
ENSAMXG00000007420 si:ch211-13k12.2
ENSELUG00000019537 si:ch211-13k12.2
ENSSSAG00000051864 si:ch211-13k12.2
ENSSSAG00000078749 si:ch211-13k12.2
ENSGMOG00000013055 si:ch211-13k12.2
ENSPREG00000006598 si:ch211-13k12.2
ENSACLG00000021171 si:ch211-13k12.2
ENSNBRG00000020167 si:ch211-13k12.2
ENSSMAG00000001611 si:ch211-13k12.2
ENSGACG00000010775 si:ch211-13k12.2
Compare expression
Teleostei

11 species

Danio rerio (zebrafish)
Anguilla anguilla (European freshwater eel)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)

12 genes

ENSDARG00000038121 si:ch211-13k12.2
118215358 LOC118215358
ENSAMXG00000007420 si:ch211-13k12.2
ENSELUG00000019537 si:ch211-13k12.2
ENSSSAG00000051864 si:ch211-13k12.2
ENSSSAG00000078749 si:ch211-13k12.2
ENSGMOG00000013055 si:ch211-13k12.2
ENSPREG00000006598 si:ch211-13k12.2
ENSACLG00000021171 si:ch211-13k12.2
ENSNBRG00000020167 si:ch211-13k12.2
ENSSMAG00000001611 si:ch211-13k12.2
ENSGACG00000010775 si:ch211-13k12.2
Compare expression
Neopterygii

12 species

Danio rerio (zebrafish)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)

13 genes

ENSDARG00000038121 si:ch211-13k12.2
ENSLOCG00000014355 si:ch211-13k12.2
118215358 LOC118215358
ENSAMXG00000007420 si:ch211-13k12.2
ENSELUG00000019537 si:ch211-13k12.2
ENSSSAG00000051864 si:ch211-13k12.2
ENSSSAG00000078749 si:ch211-13k12.2
ENSGMOG00000013055 si:ch211-13k12.2
ENSPREG00000006598 si:ch211-13k12.2
ENSACLG00000021171 si:ch211-13k12.2
ENSNBRG00000020167 si:ch211-13k12.2
ENSSMAG00000001611 si:ch211-13k12.2
ENSGACG00000010775 si:ch211-13k12.2
Compare expression
Euteleostomi

15 species

Danio rerio (zebrafish)
Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Latimeria chalumnae (Coelacanth)

17 genes

ENSDARG00000038121 si:ch211-13k12.2
100499400 ell3.L
108712872 ell3.S
ENSXETG00000027613 ell3
ENSLOCG00000014355 si:ch211-13k12.2
118215358 LOC118215358
ENSAMXG00000007420 si:ch211-13k12.2
ENSELUG00000019537 si:ch211-13k12.2
ENSSSAG00000051864 si:ch211-13k12.2
ENSSSAG00000078749 si:ch211-13k12.2
ENSGMOG00000013055 si:ch211-13k12.2
ENSPREG00000006598 si:ch211-13k12.2
ENSACLG00000021171 si:ch211-13k12.2
ENSNBRG00000020167 si:ch211-13k12.2
ENSSMAG00000001611 si:ch211-13k12.2
ENSGACG00000010775 si:ch211-13k12.2
ENSLACG00000013530 si:ch211-13k12.2
Compare expression
Chordata

16 species

Danio rerio (zebrafish)
Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Branchiostoma lanceolatum (Common lancelet)
Latimeria chalumnae (Coelacanth)

18 genes

ENSDARG00000038121 si:ch211-13k12.2
100499400 ell3.L
108712872 ell3.S
ENSXETG00000027613 ell3
ENSLOCG00000014355 si:ch211-13k12.2
118215358 LOC118215358
ENSAMXG00000007420 si:ch211-13k12.2
ENSELUG00000019537 si:ch211-13k12.2
ENSSSAG00000051864 si:ch211-13k12.2
ENSSSAG00000078749 si:ch211-13k12.2
ENSGMOG00000013055 si:ch211-13k12.2
ENSPREG00000006598 si:ch211-13k12.2
ENSACLG00000021171 si:ch211-13k12.2
ENSNBRG00000020167 si:ch211-13k12.2
ENSSMAG00000001611 si:ch211-13k12.2
ENSGACG00000010775 si:ch211-13k12.2
BL19087 ELL
ENSLACG00000013530 si:ch211-13k12.2
Compare expression
Bilateria

17 species

Danio rerio (zebrafish)
Caenorhabditis elegans (nematode)
Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Branchiostoma lanceolatum (Common lancelet)
Latimeria chalumnae (Coelacanth)

19 genes

ENSDARG00000038121 si:ch211-13k12.2
WBGene00021281 ell-1
100499400 ell3.L
108712872 ell3.S
ENSXETG00000027613 ell3
ENSLOCG00000014355 si:ch211-13k12.2
118215358 LOC118215358
ENSAMXG00000007420 si:ch211-13k12.2
ENSELUG00000019537 si:ch211-13k12.2
ENSSSAG00000051864 si:ch211-13k12.2
ENSSSAG00000078749 si:ch211-13k12.2
ENSGMOG00000013055 si:ch211-13k12.2
ENSPREG00000006598 si:ch211-13k12.2
ENSACLG00000021171 si:ch211-13k12.2
ENSNBRG00000020167 si:ch211-13k12.2
ENSSMAG00000001611 si:ch211-13k12.2
ENSGACG00000010775 si:ch211-13k12.2
BL19087 ELL
ENSLACG00000013530 si:ch211-13k12.2
Compare expression
Orthology information comes from OMA : ENSORLG00000008312.

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Neopterygii

1 gene

ENSORLG00000012652 LOC101155504

Compare expression: table | graph

Vertebrata

Compare expression: table | graph

Paralogy information comes from OMA : ENSORLG00000008312.

Cross-references

Ensembl

ENSORLG00000008312 (si:ch211-13k12.2)

ZFIN

ZDB-GENE-061207-5 (si:ch211-13k12.2)

UniProtKB/TrEMBL