Search Genes

Gene : Scn1a - ENSRNOG00000053122 - Rattus norvegicus (rat)

General information

Expressed in Ammon's horn and 5 other cell types or tissues.

Gene identifier

ENSRNOG00000053122

Name

Scn1a

Description

sodium voltage-gated channel alpha subunit 1 [Source:RGD Symbol;Acc:69364]

Organism

Rattus norvegicus (rat)

Synonym(s)

Orthologs

48 orthologs

Paralogs

12 paralogs

Source data

Retrieve all processed expression values for that gene

Expression graph

80%

Expression table

80%

Reported absence of expression

80%

Orthologs

Filter:

Taxon Name	Species with orthologs	Gene(s)	Expression comparison
Murinae	1 species Mus musculus (mouse)	1 gene ENSMUSG00000064329 Scn1a	Compare expression
Rodentia	2 species Mus musculus (mouse) Cavia porcellus (guinea pig)	2 genes ENSMUSG00000064329 Scn1a ENSCPOG00000002666 SCN1A	Compare expression
Glires	3 species Mus musculus (mouse) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig)	3 genes ENSMUSG00000064329 Scn1a ENSOCUG00000007266 SCN1A ENSCPOG00000002666 SCN1A	Compare expression
Euarchontoglires	15 species Homo sapiens (human) Mus musculus (mouse) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey)	15 genes ENSG00000144285 SCN1A ENSMUSG00000064329 Scn1a ENSOCUG00000007266 SCN1A ENSCPOG00000002666 SCN1A ENSCJAG00000006343 SCN1A ENSCATG00000029493 SCN1A ENSMFAG00000031169 SCN1A ENSMMUG00000008407 SCN1A ENSMNEG00000038343 SCN1A ENSPANG00000000722 SCN1A ENSGGOG00000005441 SCN1A ENSPPAG00000036743 SCN1A ENSPTRG00000012595 SCN1A ENSMICG00000004920 SCN1A ENSCSAG00000015438 SCN1A	Compare expression
Boreoeutheria	23 species Homo sapiens (human) Mus musculus (mouse) Canis lupus familiaris (dog) Felis catus (cat) Equus caballus (horse) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin)	23 genes ENSG00000144285 SCN1A ENSMUSG00000064329 Scn1a ENSCAFG00000005058 SCN1A ENSFCAG00000030973 SCN1A ENSECAG00000015359 SCN1A ENSSSCG00000024204 SCN1A ENSBTAG00000018520 SCN1A ENSCHIG00000024980 SCN1A ENSOARG00000004852 SCN1A ENSOCUG00000007266 SCN1A ENSCPOG00000002666 SCN1A ENSCJAG00000006343 SCN1A ENSCATG00000029493 SCN1A ENSMFAG00000031169 SCN1A ENSMMUG00000008407 SCN1A ENSMNEG00000038343 SCN1A ENSPANG00000000722 SCN1A ENSGGOG00000005441 SCN1A ENSPPAG00000036743 SCN1A ENSPTRG00000012595 SCN1A ENSMICG00000004920 SCN1A ENSCSAG00000015438 SCN1A 108390098 SCN1A	Compare expression
Theria	24 species Homo sapiens (human) Mus musculus (mouse) Canis lupus familiaris (dog) Felis catus (cat) Equus caballus (horse) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Monodelphis domestica (opossum)	24 genes ENSG00000144285 SCN1A ENSMUSG00000064329 Scn1a ENSCAFG00000005058 SCN1A ENSFCAG00000030973 SCN1A ENSECAG00000015359 SCN1A ENSSSCG00000024204 SCN1A ENSBTAG00000018520 SCN1A ENSCHIG00000024980 SCN1A ENSOARG00000004852 SCN1A ENSOCUG00000007266 SCN1A ENSCPOG00000002666 SCN1A ENSCJAG00000006343 SCN1A ENSCATG00000029493 SCN1A ENSMFAG00000031169 SCN1A ENSMMUG00000008407 SCN1A ENSMNEG00000038343 SCN1A ENSPANG00000000722 SCN1A ENSGGOG00000005441 SCN1A ENSPPAG00000036743 SCN1A ENSPTRG00000012595 SCN1A ENSMICG00000004920 SCN1A ENSCSAG00000015438 SCN1A 108390098 SCN1A ENSMODG00000006537 SCN1A	Compare expression
Mammalia	25 species Homo sapiens (human) Mus musculus (mouse) Canis lupus familiaris (dog) Felis catus (cat) Equus caballus (horse) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Monodelphis domestica (opossum)	25 genes ENSG00000144285 SCN1A ENSMUSG00000064329 Scn1a ENSCAFG00000005058 SCN1A ENSFCAG00000030973 SCN1A ENSECAG00000015359 SCN1A ENSSSCG00000024204 SCN1A ENSBTAG00000018520 SCN1A ENSCHIG00000024980 SCN1A ENSOARG00000004852 SCN1A ENSOCUG00000007266 SCN1A ENSCPOG00000002666 SCN1A ENSOANG00000006225 SCN1A ENSCJAG00000006343 SCN1A ENSCATG00000029493 SCN1A ENSMFAG00000031169 SCN1A ENSMMUG00000008407 SCN1A ENSMNEG00000038343 SCN1A ENSPANG00000000722 SCN1A ENSGGOG00000005441 SCN1A ENSPPAG00000036743 SCN1A ENSPTRG00000012595 SCN1A ENSMICG00000004920 SCN1A ENSCSAG00000015438 SCN1A 108390098 SCN1A ENSMODG00000006537 SCN1A	Compare expression
Amniota	28 species Homo sapiens (human) Mus musculus (mouse) Canis lupus familiaris (dog) Felis catus (cat) Equus caballus (horse) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig) Gallus gallus (chicken) Meleagris gallopavo (Wild turkey) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Monodelphis domestica (opossum) Anolis carolinensis (green anole)	28 genes ENSG00000144285 SCN1A ENSMUSG00000064329 Scn1a ENSCAFG00000005058 SCN1A ENSFCAG00000030973 SCN1A ENSECAG00000015359 SCN1A ENSSSCG00000024204 SCN1A ENSBTAG00000018520 SCN1A ENSCHIG00000024980 SCN1A ENSOARG00000004852 SCN1A ENSOCUG00000007266 SCN1A ENSCPOG00000002666 SCN1A ENSGALG00000010943 SCN1A ENSMGAG00000010669 SCN1A ENSOANG00000006225 SCN1A ENSCJAG00000006343 SCN1A ENSCATG00000029493 SCN1A ENSMFAG00000031169 SCN1A ENSMMUG00000008407 SCN1A ENSMNEG00000038343 SCN1A ENSPANG00000000722 SCN1A ENSGGOG00000005441 SCN1A ENSPPAG00000036743 SCN1A ENSPTRG00000012595 SCN1A ENSMICG00000004920 SCN1A ENSCSAG00000015438 SCN1A 108390098 SCN1A ENSMODG00000006537 SCN1A ENSACAG00000002844 SCN1A	Compare expression
Euteleostomi	41 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Canis lupus familiaris (dog) Felis catus (cat) Equus caballus (horse) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig) Gallus gallus (chicken) Meleagris gallopavo (Wild turkey) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Monodelphis domestica (opossum) Anolis carolinensis (green anole) Lepisosteus oculatus (Spotted gar) Anguilla anguilla (European freshwater eel) Astyanax mexicanus (Blind cave fish) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback)	45 genes ENSG00000144285 SCN1A ENSMUSG00000064329 Scn1a ENSDARG00000062744 scn1lab ENSCAFG00000005058 SCN1A ENSFCAG00000030973 SCN1A ENSECAG00000015359 SCN1A ENSSSCG00000024204 SCN1A ENSBTAG00000018520 SCN1A ENSCHIG00000024980 SCN1A ENSOARG00000004852 SCN1A ENSOCUG00000007266 SCN1A ENSCPOG00000002666 SCN1A ENSGALG00000010943 SCN1A ENSMGAG00000010669 SCN1A ENSOANG00000006225 SCN1A ENSCJAG00000006343 SCN1A ENSCATG00000029493 SCN1A ENSMFAG00000031169 SCN1A ENSMMUG00000008407 SCN1A ENSMNEG00000038343 SCN1A ENSPANG00000000722 SCN1A ENSGGOG00000005441 SCN1A ENSPPAG00000036743 SCN1A ENSPTRG00000012595 SCN1A ENSMICG00000004920 SCN1A ENSCSAG00000015438 SCN1A 108390098 SCN1A ENSMODG00000006537 SCN1A ENSACAG00000002844 SCN1A ENSLOCG00000008347 scn1lab 118223119 scn1laa ENSAMXG00000004964 scn1lab ENSELUG00000019931 scn1laa ENSELUG00000022287 scn1lab ENSSSAG00000006493 scn1lab ENSSSAG00000071355 scn1lab ENSSSAG00000079565 scn1laa ENSSSAG00000080905 scn1laa ENSGMOG00000001923 scn1lab ENSPREG00000013496 scn1lab ENSORLG00000003411 scn1lab ENSACLG00000025753 scn1lab ENSNBRG00000022307 scn1lab ENSSMAG00000000732 scn1lab ENSGACG00000013923 scn1lab	Compare expression
Chordata	42 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Canis lupus familiaris (dog) Felis catus (cat) Equus caballus (horse) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig) Gallus gallus (chicken) Meleagris gallopavo (Wild turkey) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Monodelphis domestica (opossum) Anolis carolinensis (green anole) Lepisosteus oculatus (Spotted gar) Anguilla anguilla (European freshwater eel) Astyanax mexicanus (Blind cave fish) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Branchiostoma lanceolatum (Common lancelet)	46 genes ENSG00000144285 SCN1A ENSMUSG00000064329 Scn1a ENSDARG00000062744 scn1lab ENSCAFG00000005058 SCN1A ENSFCAG00000030973 SCN1A ENSECAG00000015359 SCN1A ENSSSCG00000024204 SCN1A ENSBTAG00000018520 SCN1A ENSCHIG00000024980 SCN1A ENSOARG00000004852 SCN1A ENSOCUG00000007266 SCN1A ENSCPOG00000002666 SCN1A ENSGALG00000010943 SCN1A ENSMGAG00000010669 SCN1A ENSOANG00000006225 SCN1A ENSCJAG00000006343 SCN1A ENSCATG00000029493 SCN1A ENSMFAG00000031169 SCN1A ENSMMUG00000008407 SCN1A ENSMNEG00000038343 SCN1A ENSPANG00000000722 SCN1A ENSGGOG00000005441 SCN1A ENSPPAG00000036743 SCN1A ENSPTRG00000012595 SCN1A ENSMICG00000004920 SCN1A ENSCSAG00000015438 SCN1A 108390098 SCN1A ENSMODG00000006537 SCN1A ENSACAG00000002844 SCN1A ENSLOCG00000008347 scn1lab 118223119 scn1laa ENSAMXG00000004964 scn1lab ENSELUG00000019931 scn1laa ENSELUG00000022287 scn1lab ENSSSAG00000006493 scn1lab ENSSSAG00000071355 scn1lab ENSSSAG00000079565 scn1laa ENSSSAG00000080905 scn1laa ENSGMOG00000001923 scn1lab ENSPREG00000013496 scn1lab ENSORLG00000003411 scn1lab ENSACLG00000025753 scn1lab ENSNBRG00000022307 scn1lab ENSSMAG00000000732 scn1lab ENSGACG00000013923 scn1lab BL07440 SCN11A	Compare expression
Bilateria	44 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Drosophila melanogaster (fruit fly) Canis lupus familiaris (dog) Felis catus (cat) Equus caballus (horse) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig) Gallus gallus (chicken) Meleagris gallopavo (Wild turkey) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Monodelphis domestica (opossum) Anolis carolinensis (green anole) Lepisosteus oculatus (Spotted gar) Anguilla anguilla (European freshwater eel) Astyanax mexicanus (Blind cave fish) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Branchiostoma lanceolatum (Common lancelet) Drosophila pseudoobscura ()	48 genes ENSG00000144285 SCN1A ENSMUSG00000064329 Scn1a ENSDARG00000062744 scn1lab FBgn0285944 para ENSCAFG00000005058 SCN1A ENSFCAG00000030973 SCN1A ENSECAG00000015359 SCN1A ENSSSCG00000024204 SCN1A ENSBTAG00000018520 SCN1A ENSCHIG00000024980 SCN1A ENSOARG00000004852 SCN1A ENSOCUG00000007266 SCN1A ENSCPOG00000002666 SCN1A ENSGALG00000010943 SCN1A ENSMGAG00000010669 SCN1A ENSOANG00000006225 SCN1A ENSCJAG00000006343 SCN1A ENSCATG00000029493 SCN1A ENSMFAG00000031169 SCN1A ENSMMUG00000008407 SCN1A ENSMNEG00000038343 SCN1A ENSPANG00000000722 SCN1A ENSGGOG00000005441 SCN1A ENSPPAG00000036743 SCN1A ENSPTRG00000012595 SCN1A ENSMICG00000004920 SCN1A ENSCSAG00000015438 SCN1A 108390098 SCN1A ENSMODG00000006537 SCN1A ENSACAG00000002844 SCN1A ENSLOCG00000008347 scn1lab 118223119 scn1laa ENSAMXG00000004964 scn1lab ENSELUG00000019931 scn1laa ENSELUG00000022287 scn1lab ENSSSAG00000006493 scn1lab ENSSSAG00000071355 scn1lab ENSSSAG00000079565 scn1laa ENSSSAG00000080905 scn1laa ENSGMOG00000001923 scn1lab ENSPREG00000013496 scn1lab ENSORLG00000003411 scn1lab ENSACLG00000025753 scn1lab ENSNBRG00000022307 scn1lab ENSSMAG00000000732 scn1lab ENSGACG00000013923 scn1lab BL07440 SCN11A FBgn0082095 Dpse\GA22114	Compare expression

Showing 1 to 11 of 11 entries

Orthology information comes from OMA : ENSRNOG00000053122.

Paralogs (same species)

Filter:

Taxon Name	Gene(s)	Expression comparison
Sarcopterygii	2 genes ENSRNOG00000005007 Scn3a ENSRNOG00000005018 Scn2a	Compare expression: table \| graph
Vertebrata	8 genes ENSRNOG00000005007 Scn3a ENSRNOG00000005018 Scn2a ENSRNOG00000005309 Scn8a ENSRNOG00000006639 Scn9a ENSRNOG00000012134 Scn4a ENSRNOG00000015049 Scn5a ENSRNOG00000032473 Scn10a ENSRNOG00000032884 Scn11a	Compare expression: table \| graph
Bilateria	9 genes ENSRNOG00000005007 Scn3a ENSRNOG00000005018 Scn2a ENSRNOG00000005309 Scn8a ENSRNOG00000006639 Scn9a ENSRNOG00000012134 Scn4a ENSRNOG00000015049 Scn5a ENSRNOG00000029342 Scn7a ENSRNOG00000032473 Scn10a ENSRNOG00000032884 Scn11a	Compare expression: table \| graph
Opisthokonta	12 genes ENSRNOG00000005007 Scn3a ENSRNOG00000005018 Scn2a ENSRNOG00000005309 Scn8a ENSRNOG00000006639 Scn9a ENSRNOG00000012134 Scn4a ENSRNOG00000015049 Scn5a ENSRNOG00000029342 Scn7a ENSRNOG00000032473 Scn10a ENSRNOG00000032884 Scn11a ENSRNOG00000033893 Cacna1h ENSRNOG00000060407 Cacna1i ENSRNOG00000060528 Cacna1g	Compare expression: table \| graph

Showing 1 to 4 of 4 entries

Paralogy information comes from OMA : ENSRNOG00000053122.

Cross-references

Ensembl

ENSRNOG00000053122 (Scn1a)

RGD

69364 (Scn1a)

EMBL

AABR07052424,AABR07052425,AABR07052426,AABR07052427,AABR07072861,AC122968

UniProtKB/TrEMBL

A0A0G2K6Y2,A0A0G2K6Y2_RAT,A0A0G2K914,A0A0G2K914_RAT