Search Genes

Gene : pcdh1 - ENSXETG00000001875 - Xenopus tropicalis (western clawed frog)

General information

Expressed in 4-cell stage embryo and 25 other cell types or tissues.

Gene identifier

ENSXETG00000001875

Name

pcdh1

Description

protocadherin 1 [Source:Xenbase;Acc:XB-GENE-983603]

Organism

Xenopus tropicalis (western clawed frog)

Synonym(s)

Orthologs

91 orthologs

Paralogs

3 paralogs

Source data

Retrieve all processed expression values for that gene

Expression graph

80%

Expression table

80%

Reported absence of expression

80%

Orthologs

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Taxon Name	Species with orthologs	Gene(s)	Expression comparison
Xenopus	1 species Xenopus laevis (African clawed frog)	3 genes 100191020 pcdh1.L 108709480 avpr1b.S 108713293 pcdh1.S	Compare expression
Tetrapoda	30 species Homo sapiens (human) Mus musculus (mouse) Canis lupus familiaris (dog) Felis catus (cat) Equus caballus (horse) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig) Gallus gallus (chicken) Meleagris gallopavo (Wild turkey) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Monodelphis domestica (opossum) Xenopus laevis (African clawed frog) Anolis carolinensis (green anole)	59 genes ENSG00000156453 PCDH1 ENSG00000198049 AVPR1B ENSMUSG00000026432 Avpr1b ENSMUSG00000051375 Pcdh1 ENSCAFG00000006229 PCDH1 ENSCAFG00000010214 AVPR1B ENSFCAG00000006732 AVPR1B ENSFCAG00000009395 PCDH1 ENSECAG00000013720 AVPR1B ENSECAG00000015153 PCDH1 ENSSSCG00000015639 AVPR1B ENSSSCG00000022289 PCDH1 ENSBTAG00000012518 PCDH1 ENSBTAG00000017301 AVPR1B ENSCHIG00000013193 PCDH1 ENSCHIG00000016302 AVPR1B ENSOARG00000001308 PCDH1 ENSOARG00000005069 AVPR1B ENSOCUG00000007352 AVPR1B ENSOCUG00000016923 PCDH1 ENSCPOG00000005750 PCDH1 ENSCPOG00000036821 AVPR1B ENSGALG00000000788 AVPR1B ENSGALG00000002553 PCDH1 ENSMGAG00000001227 PCDH1 ENSMGAG00000003443 AVPR1B ENSOANG00000039962 AVPR1B ENSOANG00000050778 PCDH1 ENSCJAG00000018174 PCDH1 ENSCJAG00000047274 AVPR1B ENSCATG00000034071 PCDH1 ENSCATG00000043158 AVPR1B ENSMFAG00000035695 PCDH1 ENSMFAG00000040573 AVPR1B ENSMMUG00000008710 PCDH1 ENSMMUG00000054385 AVPR1B ENSMNEG00000030768 PCDH1 ENSMNEG00000042568 AVPR1B ENSPANG00000009429 PCDH1 ENSPANG00000022549 AVPR1B ENSGGOG00000000997 PCDH1 ENSGGOG00000013058 AVPR1B ENSPPAG00000036422 AVPR1B ENSPPAG00000042443 PCDH1 ENSPTRG00000023708 AVPR1B ENSPTRG00000040496 PCDH1 ENSMICG00000017453 PCDH1 ENSCSAG00000012421 PCDH1 ENSCSAG00000014889 AVPR1B 108390194 AVPR1B 108405530 PCDH1 ENSRNOG00000048522 Avpr1b ENSRNOG00000060410 Pcdh1 ENSMODG00000001960 AVPR1B ENSMODG00000010471 PCDH1 100191020 pcdh1.L 108709480 avpr1b.S 108713293 pcdh1.S ENSACAG00000014355 PCDH1	Compare expression
Sarcopterygii	31 species Homo sapiens (human) Mus musculus (mouse) Canis lupus familiaris (dog) Felis catus (cat) Equus caballus (horse) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig) Gallus gallus (chicken) Meleagris gallopavo (Wild turkey) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Monodelphis domestica (opossum) Xenopus laevis (African clawed frog) Anolis carolinensis (green anole) Latimeria chalumnae (Coelacanth)	61 genes ENSG00000156453 PCDH1 ENSG00000198049 AVPR1B ENSMUSG00000026432 Avpr1b ENSMUSG00000051375 Pcdh1 ENSCAFG00000006229 PCDH1 ENSCAFG00000010214 AVPR1B ENSFCAG00000006732 AVPR1B ENSFCAG00000009395 PCDH1 ENSECAG00000013720 AVPR1B ENSECAG00000015153 PCDH1 ENSSSCG00000015639 AVPR1B ENSSSCG00000022289 PCDH1 ENSBTAG00000012518 PCDH1 ENSBTAG00000017301 AVPR1B ENSCHIG00000013193 PCDH1 ENSCHIG00000016302 AVPR1B ENSOARG00000001308 PCDH1 ENSOARG00000005069 AVPR1B ENSOCUG00000007352 AVPR1B ENSOCUG00000016923 PCDH1 ENSCPOG00000005750 PCDH1 ENSCPOG00000036821 AVPR1B ENSGALG00000000788 AVPR1B ENSGALG00000002553 PCDH1 ENSMGAG00000001227 PCDH1 ENSMGAG00000003443 AVPR1B ENSOANG00000039962 AVPR1B ENSOANG00000050778 PCDH1 ENSCJAG00000018174 PCDH1 ENSCJAG00000047274 AVPR1B ENSCATG00000034071 PCDH1 ENSCATG00000043158 AVPR1B ENSMFAG00000035695 PCDH1 ENSMFAG00000040573 AVPR1B ENSMMUG00000008710 PCDH1 ENSMMUG00000054385 AVPR1B ENSMNEG00000030768 PCDH1 ENSMNEG00000042568 AVPR1B ENSPANG00000009429 PCDH1 ENSPANG00000022549 AVPR1B ENSGGOG00000000997 PCDH1 ENSGGOG00000013058 AVPR1B ENSPPAG00000036422 AVPR1B ENSPPAG00000042443 PCDH1 ENSPTRG00000023708 AVPR1B ENSPTRG00000040496 PCDH1 ENSMICG00000017453 PCDH1 ENSCSAG00000012421 PCDH1 ENSCSAG00000014889 AVPR1B 108390194 AVPR1B 108405530 PCDH1 ENSRNOG00000048522 Avpr1b ENSRNOG00000060410 Pcdh1 ENSMODG00000001960 AVPR1B ENSMODG00000010471 PCDH1 100191020 pcdh1.L 108709480 avpr1b.S 108713293 pcdh1.S ENSACAG00000014355 PCDH1 ENSLACG00000013680 AVPR1B ENSLACG00000015969 PCDH1	Compare expression
Euteleostomi	45 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Canis lupus familiaris (dog) Felis catus (cat) Equus caballus (horse) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig) Gallus gallus (chicken) Meleagris gallopavo (Wild turkey) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Monodelphis domestica (opossum) Xenopus laevis (African clawed frog) Anolis carolinensis (green anole) Lepisosteus oculatus (Spotted gar) Anguilla anguilla (European freshwater eel) Astyanax mexicanus (Blind cave fish) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish) Latimeria chalumnae (Coelacanth)	89 genes ENSG00000156453 PCDH1 ENSG00000198049 AVPR1B ENSMUSG00000026432 Avpr1b ENSMUSG00000051375 Pcdh1 ENSDARG00000036175 pcdh1b ENSDARG00000062720 pcdh1a ENSDARG00000109936 CT030123.1 ENSCAFG00000006229 PCDH1 ENSCAFG00000010214 AVPR1B ENSFCAG00000006732 AVPR1B ENSFCAG00000009395 PCDH1 ENSECAG00000013720 AVPR1B ENSECAG00000015153 PCDH1 ENSSSCG00000015639 AVPR1B ENSSSCG00000022289 PCDH1 ENSBTAG00000012518 PCDH1 ENSBTAG00000017301 AVPR1B ENSCHIG00000013193 PCDH1 ENSCHIG00000016302 AVPR1B ENSOARG00000001308 PCDH1 ENSOARG00000005069 AVPR1B ENSOCUG00000007352 AVPR1B ENSOCUG00000016923 PCDH1 ENSCPOG00000005750 PCDH1 ENSCPOG00000036821 AVPR1B ENSGALG00000000788 AVPR1B ENSGALG00000002553 PCDH1 ENSMGAG00000001227 PCDH1 ENSMGAG00000003443 AVPR1B ENSOANG00000039962 AVPR1B ENSOANG00000050778 PCDH1 ENSCJAG00000018174 PCDH1 ENSCJAG00000047274 AVPR1B ENSCATG00000034071 PCDH1 ENSCATG00000043158 AVPR1B ENSMFAG00000035695 PCDH1 ENSMFAG00000040573 AVPR1B ENSMMUG00000008710 PCDH1 ENSMMUG00000054385 AVPR1B ENSMNEG00000030768 PCDH1 ENSMNEG00000042568 AVPR1B ENSPANG00000009429 PCDH1 ENSPANG00000022549 AVPR1B ENSGGOG00000000997 PCDH1 ENSGGOG00000013058 AVPR1B ENSPPAG00000036422 AVPR1B ENSPPAG00000042443 PCDH1 ENSPTRG00000023708 AVPR1B ENSPTRG00000040496 PCDH1 ENSMICG00000017453 PCDH1 ENSCSAG00000012421 PCDH1 ENSCSAG00000014889 AVPR1B 108390194 AVPR1B 108405530 PCDH1 ENSRNOG00000048522 Avpr1b ENSRNOG00000060410 Pcdh1 ENSMODG00000001960 AVPR1B ENSMODG00000010471 PCDH1 100191020 pcdh1.L 108709480 avpr1b.S 108713293 pcdh1.S ENSACAG00000014355 PCDH1 ENSLOCG00000011506 pcdh1a 118223292 pcdh1b 118235930 LOC118235930 ENSAMXG00000002124 pcdh1b ENSAMXG00000010404 pcdh1a ENSELUG00000013039 pcdh1a ENSELUG00000021653 pcdh1b ENSSSAG00000002398 pcdh1b ENSSSAG00000009668 pcdh1a ENSSSAG00000076401 pcdh1a ENSGMOG00000013452 pcdh1b ENSGMOG00000019252 pcdh1a ENSPREG00000001526 pcdh1a ENSPREG00000014812 pcdh1b ENSORLG00000010092 pcdh1a ENSORLG00000011559 pcdh1b ENSACLG00000008333 pcdh1a ENSACLG00000016940 pcdh1b ENSNBRG00000013804 pcdh1b ENSNBRG00000013845 pcdh1a ENSSMAG00000007094 pcdh1b ENSSMAG00000018935 pcdh1a ENSGACG00000016360 pcdh1b ENSGACG00000020313 pcdh1a ENSNFUG00015025071 PCDH1A ENSLACG00000013680 AVPR1B ENSLACG00000015969 PCDH1	Compare expression
Chordata	46 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Canis lupus familiaris (dog) Felis catus (cat) Equus caballus (horse) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig) Gallus gallus (chicken) Meleagris gallopavo (Wild turkey) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Monodelphis domestica (opossum) Xenopus laevis (African clawed frog) Anolis carolinensis (green anole) Lepisosteus oculatus (Spotted gar) Anguilla anguilla (European freshwater eel) Astyanax mexicanus (Blind cave fish) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish) Branchiostoma lanceolatum (Common lancelet) Latimeria chalumnae (Coelacanth)	91 genes ENSG00000156453 PCDH1 ENSG00000198049 AVPR1B ENSMUSG00000026432 Avpr1b ENSMUSG00000051375 Pcdh1 ENSDARG00000036175 pcdh1b ENSDARG00000062720 pcdh1a ENSDARG00000109936 CT030123.1 ENSCAFG00000006229 PCDH1 ENSCAFG00000010214 AVPR1B ENSFCAG00000006732 AVPR1B ENSFCAG00000009395 PCDH1 ENSECAG00000013720 AVPR1B ENSECAG00000015153 PCDH1 ENSSSCG00000015639 AVPR1B ENSSSCG00000022289 PCDH1 ENSBTAG00000012518 PCDH1 ENSBTAG00000017301 AVPR1B ENSCHIG00000013193 PCDH1 ENSCHIG00000016302 AVPR1B ENSOARG00000001308 PCDH1 ENSOARG00000005069 AVPR1B ENSOCUG00000007352 AVPR1B ENSOCUG00000016923 PCDH1 ENSCPOG00000005750 PCDH1 ENSCPOG00000036821 AVPR1B ENSGALG00000000788 AVPR1B ENSGALG00000002553 PCDH1 ENSMGAG00000001227 PCDH1 ENSMGAG00000003443 AVPR1B ENSOANG00000039962 AVPR1B ENSOANG00000050778 PCDH1 ENSCJAG00000018174 PCDH1 ENSCJAG00000047274 AVPR1B ENSCATG00000034071 PCDH1 ENSCATG00000043158 AVPR1B ENSMFAG00000035695 PCDH1 ENSMFAG00000040573 AVPR1B ENSMMUG00000008710 PCDH1 ENSMMUG00000054385 AVPR1B ENSMNEG00000030768 PCDH1 ENSMNEG00000042568 AVPR1B ENSPANG00000009429 PCDH1 ENSPANG00000022549 AVPR1B ENSGGOG00000000997 PCDH1 ENSGGOG00000013058 AVPR1B ENSPPAG00000036422 AVPR1B ENSPPAG00000042443 PCDH1 ENSPTRG00000023708 AVPR1B ENSPTRG00000040496 PCDH1 ENSMICG00000017453 PCDH1 ENSCSAG00000012421 PCDH1 ENSCSAG00000014889 AVPR1B 108390194 AVPR1B 108405530 PCDH1 ENSRNOG00000048522 Avpr1b ENSRNOG00000060410 Pcdh1 ENSMODG00000001960 AVPR1B ENSMODG00000010471 PCDH1 100191020 pcdh1.L 108709480 avpr1b.S 108713293 pcdh1.S ENSACAG00000014355 PCDH1 ENSLOCG00000011506 pcdh1a 118223292 pcdh1b 118235930 LOC118235930 ENSAMXG00000002124 pcdh1b ENSAMXG00000010404 pcdh1a ENSELUG00000013039 pcdh1a ENSELUG00000021653 pcdh1b ENSSSAG00000002398 pcdh1b ENSSSAG00000009668 pcdh1a ENSSSAG00000076401 pcdh1a ENSGMOG00000013452 pcdh1b ENSGMOG00000019252 pcdh1a ENSPREG00000001526 pcdh1a ENSPREG00000014812 pcdh1b ENSORLG00000010092 pcdh1a ENSORLG00000011559 pcdh1b ENSACLG00000008333 pcdh1a ENSACLG00000016940 pcdh1b ENSNBRG00000013804 pcdh1b ENSNBRG00000013845 pcdh1a ENSSMAG00000007094 pcdh1b ENSSMAG00000018935 pcdh1a ENSGACG00000016360 pcdh1b ENSGACG00000020313 pcdh1a ENSNFUG00015025071 PCDH1A BL01164 ENSG00000265027 BL09609 ENSG00000265027 ENSLACG00000013680 AVPR1B ENSLACG00000015969 PCDH1	Compare expression

Showing 1 to 5 of 5 entries

Paralogs (same species)

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Taxon Name	Gene(s)	Expression comparison	See details
Vertebrata	3 genes ENSXETG00000001441 oxtr ENSXETG00000015741 avpr2.2 ENSXETG00000018781 avpr1a	Compare expression: table \| graph

Showing 1 to 1 of 1 entries

Cross-references

Ensembl

ENSXETG00000001875 (pcdh1)

Xenbase

XB-GENE-983603 (pcdh1)

EMBL

BC135899

UniProtKB/TrEMBL

A0A6I8SHG0,A0A6I8SHG0_XENTR,A4II80,A4II80_XENTR,F6XE74,F6XE74_XENTR