Search Genes

Gene : col2a1 - ENSXETG00000010655 - Xenopus tropicalis (western clawed frog)

General information

Expressed in neurula embryo and 21 other cell types or tissues.

Gene identifier

ENSXETG00000010655

Name

col2a1

Description

collagen, type II, alpha 1 [Source:Xenbase;Acc:XB-GENE-6258353]

Organism

Xenopus tropicalis (western clawed frog)

Synonym(s)

Orthologs

43 orthologs

Paralogs

139 paralogs

Source data

Retrieve all processed expression values for that gene

Expression graph

80%

Expression table

80%

Reported absence of expression

80%

Orthologs

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Taxon Name	Species with orthologs	Gene(s)	Expression comparison
Tetrapoda	27 species Homo sapiens (human) Mus musculus (mouse) Canis lupus familiaris (dog) Felis catus (cat) Equus caballus (horse) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig) Gallus gallus (chicken) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Anolis carolinensis (green anole)	27 genes ENSG00000139219 COL2A1 ENSMUSG00000022483 Col2a1 ENSCAFG00000009059 COL2A1 ENSFCAG00000014002 COL2A1 ENSECAG00000022313 COL2A1 ENSSSCG00000025523 COL2A1 ENSBTAG00000013155 COL2A1 ENSCHIG00000009616 COL2A1 ENSOARG00000019333 COL2A1 ENSOCUG00000013629 COL2A1 ENSCPOG00000000832 COL2A1 ENSGALG00000030712 COL2A1 ENSOANG00000042168 COL2A1 ENSCJAG00000015054 COL2A1 ENSCATG00000043631 COL2A1 ENSMFAG00000031247 COL2A1 ENSMMUG00000011444 COL2A1 ENSMNEG00000034245 COL2A1 ENSPANG00000020674 COL2A1 ENSGGOG00000004310 COL2A1 ENSPPAG00000027130 ENSPTRG00000004871 COL2A1 ENSMICG00000009035 COL2A1 ENSCSAG00000006460 COL2A1 108392454 COL2A1 ENSRNOG00000058560 Col2a1 ENSACAG00000006064 COL2A1	Compare expression
Sarcopterygii	28 species Homo sapiens (human) Mus musculus (mouse) Canis lupus familiaris (dog) Felis catus (cat) Equus caballus (horse) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig) Gallus gallus (chicken) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Anolis carolinensis (green anole) Latimeria chalumnae (Coelacanth)	28 genes ENSG00000139219 COL2A1 ENSMUSG00000022483 Col2a1 ENSCAFG00000009059 COL2A1 ENSFCAG00000014002 COL2A1 ENSECAG00000022313 COL2A1 ENSSSCG00000025523 COL2A1 ENSBTAG00000013155 COL2A1 ENSCHIG00000009616 COL2A1 ENSOARG00000019333 COL2A1 ENSOCUG00000013629 COL2A1 ENSCPOG00000000832 COL2A1 ENSGALG00000030712 COL2A1 ENSOANG00000042168 COL2A1 ENSCJAG00000015054 COL2A1 ENSCATG00000043631 COL2A1 ENSMFAG00000031247 COL2A1 ENSMMUG00000011444 COL2A1 ENSMNEG00000034245 COL2A1 ENSPANG00000020674 COL2A1 ENSGGOG00000004310 COL2A1 ENSPPAG00000027130 ENSPTRG00000004871 COL2A1 ENSMICG00000009035 COL2A1 ENSCSAG00000006460 COL2A1 108392454 COL2A1 ENSRNOG00000058560 Col2a1 ENSACAG00000006064 COL2A1 ENSLACG00000019101 COL2A1	Compare expression
Euteleostomi	40 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Canis lupus familiaris (dog) Felis catus (cat) Equus caballus (horse) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig) Gallus gallus (chicken) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Anolis carolinensis (green anole) Lepisosteus oculatus (Spotted gar) Anguilla anguilla (European freshwater eel) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish) Latimeria chalumnae (Coelacanth)	42 genes ENSG00000139219 COL2A1 ENSMUSG00000022483 Col2a1 ENSDARG00000011407 col2a1b ENSCAFG00000009059 COL2A1 ENSFCAG00000014002 COL2A1 ENSECAG00000022313 COL2A1 ENSSSCG00000025523 COL2A1 ENSBTAG00000013155 COL2A1 ENSCHIG00000009616 COL2A1 ENSOARG00000019333 COL2A1 ENSOCUG00000013629 COL2A1 ENSCPOG00000000832 COL2A1 ENSGALG00000030712 COL2A1 ENSOANG00000042168 COL2A1 ENSCJAG00000015054 COL2A1 ENSCATG00000043631 COL2A1 ENSMFAG00000031247 COL2A1 ENSMMUG00000011444 COL2A1 ENSMNEG00000034245 COL2A1 ENSPANG00000020674 COL2A1 ENSGGOG00000004310 COL2A1 ENSPPAG00000027130 ENSPTRG00000004871 COL2A1 ENSMICG00000009035 COL2A1 ENSCSAG00000006460 COL2A1 108392454 COL2A1 ENSRNOG00000058560 Col2a1 ENSACAG00000006064 COL2A1 ENSLOCG00000005115 col2a1b 118207188 LOC118207188 118210570 col2a1b ENSELUG00000034350 COL2A1 ENSSSAG00000064261 COL2A1 ENSSSAG00000075845 COL2A1 ENSGMOG00000001436 col2a1b ENSPREG00000007539 COL2A1 ENSORLG00000005102 col2a1a ENSACLG00000017863 col2a1b ENSSMAG00000013036 COL2A1 ENSGACG00000006819 col2a1b ENSNFUG00015008689 COL2A1 ENSLACG00000019101 COL2A1	Compare expression
Chordata	41 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Canis lupus familiaris (dog) Felis catus (cat) Equus caballus (horse) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig) Gallus gallus (chicken) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Anolis carolinensis (green anole) Lepisosteus oculatus (Spotted gar) Anguilla anguilla (European freshwater eel) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish) Branchiostoma lanceolatum (Common lancelet) Latimeria chalumnae (Coelacanth)	43 genes ENSG00000139219 COL2A1 ENSMUSG00000022483 Col2a1 ENSDARG00000011407 col2a1b ENSCAFG00000009059 COL2A1 ENSFCAG00000014002 COL2A1 ENSECAG00000022313 COL2A1 ENSSSCG00000025523 COL2A1 ENSBTAG00000013155 COL2A1 ENSCHIG00000009616 COL2A1 ENSOARG00000019333 COL2A1 ENSOCUG00000013629 COL2A1 ENSCPOG00000000832 COL2A1 ENSGALG00000030712 COL2A1 ENSOANG00000042168 COL2A1 ENSCJAG00000015054 COL2A1 ENSCATG00000043631 COL2A1 ENSMFAG00000031247 COL2A1 ENSMMUG00000011444 COL2A1 ENSMNEG00000034245 COL2A1 ENSPANG00000020674 COL2A1 ENSGGOG00000004310 COL2A1 ENSPPAG00000027130 ENSPTRG00000004871 COL2A1 ENSMICG00000009035 COL2A1 ENSCSAG00000006460 COL2A1 108392454 COL2A1 ENSRNOG00000058560 Col2a1 ENSACAG00000006064 COL2A1 ENSLOCG00000005115 col2a1b 118207188 LOC118207188 118210570 col2a1b ENSELUG00000034350 COL2A1 ENSSSAG00000064261 COL2A1 ENSSSAG00000075845 COL2A1 ENSGMOG00000001436 col2a1b ENSPREG00000007539 COL2A1 ENSORLG00000005102 col2a1a ENSACLG00000017863 col2a1b ENSSMAG00000013036 COL2A1 ENSGACG00000006819 col2a1b ENSNFUG00015008689 COL2A1 BL01498 COL1A2 ENSLACG00000019101 COL2A1	Compare expression

Showing 1 to 4 of 4 entries

Paralogs (same species)

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Taxon Name	Gene(s)	Expression comparison
Vertebrata	2 genes ENSXETG00000003374 col1a1 ENSXETG00000020318 col1a2	Compare expression: table \| graph
Chordata	4 genes ENSXETG00000003374 col1a1 ENSXETG00000010783 col3a1 ENSXETG00000010784 gal3st2 ENSXETG00000020318 col1a2	Compare expression: table \| graph
Opisthokonta	139 genes ENSXETG00000000185 cdk10 ENSXETG00000000229 luc7l2 ENSXETG00000000409 XB956263 [provisional:mapk12] ENSXETG00000000426 srpk1 ENSXETG00000000436 mapk12 ENSXETG00000000438 mapk14 ENSXETG00000000481 cdk7 ENSXETG00000000580 prpf40b ENSXETG00000000735 srpk2 ENSXETG00000000848 echs1 ENSXETG00000001701 srsf3 ENSXETG00000001806 hnrnpa3 ENSXETG00000002211 srsf5 ENSXETG00000002324 tcerg1 ENSXETG00000002635 col4a2 ENSXETG00000003064 smc1b ENSXETG00000003123 cdk1 ENSXETG00000003166 cnot3 ENSXETG00000003281 cirbp ENSXETG00000003374 col1a1 ENSXETG00000004179 limk2 ENSXETG00000004577 tlr13 ENSXETG00000005300 rusc2 ENSXETG00000005391 alyref ENSXETG00000005476 cux1 ENSXETG00000005751 rad23b ENSXETG00000006199 mapk10 ENSXETG00000007397 tra2a ENSXETG00000007481 dnajc9 ENSXETG00000007511 tra2b ENSXETG00000008111 cfap45 ENSXETG00000008514 tia1 ENSXETG00000008680 elavl4 ENSXETG00000008752 elavl1 ENSXETG00000008989 ankrd28 ENSXETG00000009044 celf1 ENSXETG00000009182 sass6 ENSXETG00000009217 lrrc34 ENSXETG00000009271 rbm28 ENSXETG00000009350 sfswap ENSXETG00000009444 cdk2 ENSXETG00000009503 ankrd52 ENSXETG00000009517 ncl ENSXETG00000009717 tln2 ENSXETG00000009787 cdk8 ENSXETG00000009836 nfxl1 ENSXETG00000010038 sel1l ENSXETG00000010285 rps6ka3 ENSXETG00000010324 limk1 ENSXETG00000010344 plk1 ENSXETG00000010783 col3a1 ENSXETG00000010784 gal3st2 ENSXETG00000010835 alg6 ENSXETG00000011038 sf3b4 ENSXETG00000011062 luc7l3 ENSXETG00000011562 luc7l ENSXETG00000011646 kri1 ENSXETG00000011679 fip1l1 ENSXETG00000011808 pak2 ENSXETG00000012072 gsk3a ENSXETG00000012163 ppp1r7 ENSXETG00000012170 hnrnpa2b1 ENSXETG00000012289 rps6ka1 ENSXETG00000012372 lrrc40 ENSXETG00000012421 pak3 ENSXETG00000012850 lpp ENSXETG00000013202 sass6.2 ENSXETG00000013590 plk3 ENSXETG00000014181 dek ENSXETG00000014506 rps6ka6 ENSXETG00000014649 tln1 ENSXETG00000015449 prc1 ENSXETG00000015470 mfap1 ENSXETG00000015620 enkd1 ENSXETG00000016035 cog6 ENSXETG00000016556 mns1 ENSXETG00000016741 elavl3 ENSXETG00000017937 srsf5a ENSXETG00000018066 eci2 ENSXETG00000018081 prc1.2 ENSXETG00000018483 cwf19l2 ENSXETG00000018529 cdk6 ENSXETG00000018576 mapk1 ENSXETG00000018823 stk36 ENSXETG00000018847 plk2 ENSXETG00000018928 ccdc173 ENSXETG00000019290 stk16 ENSXETG00000019606 cdk11b ENSXETG00000019709 cdkl1 ENSXETG00000019733 ccdc146 ENSXETG00000019762 ints6l ENSXETG00000019848 gas8 ENSXETG00000020318 col1a2 ENSXETG00000020665 itgbl1 ENSXETG00000020719 ints6 ENSXETG00000021277 hnrnpa1 ENSXETG00000021324 cdk19 ENSXETG00000021614 lrrc74b ENSXETG00000021691 mapk8 ENSXETG00000021713 prpf40a ENSXETG00000021992 celf2 ENSXETG00000022129 wasl ENSXETG00000022254 mapk11 ENSXETG00000022616 fam184a ENSXETG00000023173 srpk3 ENSXETG00000023327 syvn1 ENSXETG00000023700 fbxl20 ENSXETG00000023718 shoc2 ENSXETG00000023919 phb2 ENSXETG00000023923 lrrc23 ENSXETG00000024439 rnps1 ENSXETG00000024742 cdk9 ENSXETG00000024747 smc1a ENSXETG00000024935 XB5772073 [provisional:srpk1] ENSXETG00000025300 srsf7 ENSXETG00000025471 arglu1 ENSXETG00000025994 rps6ka2 ENSXETG00000027995 cfdp1 ENSXETG00000030042 tube1 ENSXETG00000030343 slirp ENSXETG00000031391 kifc2 ENSXETG00000031480 grsf1 ENSXETG00000031843 ssc4d ENSXETG00000031912 ltb4r2 ENSXETG00000031922 mapk13 ENSXETG00000032970 ttc7b ENSXETG00000032994 XB5969698 [provisional:lamb4] ENSXETG00000034350 kctd9 ENSXETG00000035239 ccdc151 ENSXETG00000035293 ttc8 ENSXETG00000035980 echdc3 ENSXETG00000036152 cir1 ENSXETG00000036156 pan3 ENSXETG00000037228 XB1001290 ENSXETG00000038226 slc39a14 ENSXETG00000038617 trerf1 ENSXETG00000039811 LOC100492152 ENSXETG00000040575 ppp3cb ENSXETG00000041359 rarb	Compare expression: table \| graph