Astyanax mexicanus

Gene : si:rp71-17i16.4 - ENSAMXG00000012883 - Astyanax mexicanus (Blind cave fish)

General information

Expressed in camera-type eye and 10 other cell types or tissues.

Gene identifier

ENSAMXG00000012883

Name

si:rp71-17i16.4

Description

troponin C, skeletal muscle [Source:NCBI gene;Acc:103044939]

Synonym(s)

Orthologs

Paralogs

Expression graph

80%

Expression table

80%

Reported absence of expression

80%

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Otophysi

1 species

Danio rerio (zebrafish)

2 genes

Compare expression
Clupeocephala

8 species

Danio rerio (zebrafish)

Esox lucius (Northern pike)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)

9 genes

ENSDARG00000095002 TNNC2
ENSDARG00000115350 CR749762.5
ENSELUG00000010354 si:rp71-17i16.4
ENSPREG00000003934 si:rp71-17i16.4
ENSORLG00000001761 si:rp71-17i16.4
ENSACLG00000007485 si:rp71-17i16.4
ENSNBRG00000020563 tnnc2
ENSSMAG00000002506 si:rp71-17i16.4
ENSGACG00000004196 si:rp71-17i16.4
Compare expression
Teleostei

9 species

Danio rerio (zebrafish)

Anguilla anguilla (European freshwater eel)
Esox lucius (Northern pike)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)

10 genes

ENSDARG00000095002 TNNC2
ENSDARG00000115350 CR749762.5
118207455 LOC118207455
ENSELUG00000010354 si:rp71-17i16.4
ENSPREG00000003934 si:rp71-17i16.4
ENSORLG00000001761 si:rp71-17i16.4
ENSACLG00000007485 si:rp71-17i16.4
ENSNBRG00000020563 tnnc2
ENSSMAG00000002506 si:rp71-17i16.4
ENSGACG00000004196 si:rp71-17i16.4
Compare expression
Chordata

10 species

Danio rerio (zebrafish)

Anguilla anguilla (European freshwater eel)
Esox lucius (Northern pike)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Branchiostoma lanceolatum (Common lancelet)


13 genes

ENSDARG00000095002 TNNC2
ENSDARG00000115350 CR749762.5
118207455 LOC118207455
ENSELUG00000010354 si:rp71-17i16.4
ENSPREG00000003934 si:rp71-17i16.4
ENSORLG00000001761 si:rp71-17i16.4
ENSACLG00000007485 si:rp71-17i16.4
ENSNBRG00000020563 tnnc2
ENSSMAG00000002506 si:rp71-17i16.4
ENSGACG00000004196 si:rp71-17i16.4
BL08950 TNNC2
BL17579 TNNC2
BL24593 CALM1
Compare expression
Orthology information comes from OMA : ENSAMXG00000012883.

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Gnathostomata

1 gene

Compare expression: table | graph

Vertebrata

Compare expression: table | graph

Paralogy information comes from OMA : ENSAMXG00000012883.

Cross-references