Oryzias latipes

Gene : si:rp71-17i16.4 - ENSORLG00000001761 - Oryzias latipes (Japanese rice fish)

General information

Expressed in muscle tissue and 8 other cell types or tissues.

Gene identifier

ENSORLG00000001761

Name

si:rp71-17i16.4

Description

troponin C, skeletal muscle [Source:NCBI gene;Acc:101171577]

Synonym(s)

Orthologs

Paralogs

Expression graph

80%

Expression table

80%

Reported absence of expression

80%

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Atherinomorphae

1 species

1 gene

ENSPREG00000003934 si:rp71-17i16.4
Compare expression
Ovalentaria

3 species

3 genes

ENSPREG00000003934 si:rp71-17i16.4
ENSACLG00000007485 si:rp71-17i16.4
ENSNBRG00000020563 tnnc2
Compare expression
Percomorphaceae

5 species

Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)

5 genes

ENSPREG00000003934 si:rp71-17i16.4
ENSACLG00000007485 si:rp71-17i16.4
ENSNBRG00000020563 tnnc2
ENSSMAG00000002506 si:rp71-17i16.4
ENSGACG00000004196 si:rp71-17i16.4
Compare expression
Euteleosteomorpha

6 species

Esox lucius (Northern pike)
Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)

6 genes

ENSELUG00000010354 si:rp71-17i16.4
ENSPREG00000003934 si:rp71-17i16.4
ENSACLG00000007485 si:rp71-17i16.4
ENSNBRG00000020563 tnnc2
ENSSMAG00000002506 si:rp71-17i16.4
ENSGACG00000004196 si:rp71-17i16.4
Compare expression
Clupeocephala

8 species

Danio rerio (zebrafish)

Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)

9 genes

ENSDARG00000095002 TNNC2
ENSDARG00000115350 CR749762.5
ENSAMXG00000012883 si:rp71-17i16.4
ENSELUG00000010354 si:rp71-17i16.4
ENSPREG00000003934 si:rp71-17i16.4
ENSACLG00000007485 si:rp71-17i16.4
ENSNBRG00000020563 tnnc2
ENSSMAG00000002506 si:rp71-17i16.4
ENSGACG00000004196 si:rp71-17i16.4
Compare expression
Teleostei

9 species

Danio rerio (zebrafish)

Anguilla anguilla (European freshwater eel)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)

10 genes

ENSDARG00000095002 TNNC2
ENSDARG00000115350 CR749762.5
118207455 LOC118207455
ENSAMXG00000012883 si:rp71-17i16.4
ENSELUG00000010354 si:rp71-17i16.4
ENSPREG00000003934 si:rp71-17i16.4
ENSACLG00000007485 si:rp71-17i16.4
ENSNBRG00000020563 tnnc2
ENSSMAG00000002506 si:rp71-17i16.4
ENSGACG00000004196 si:rp71-17i16.4
Compare expression
Chordata

10 species

Danio rerio (zebrafish)

Anguilla anguilla (European freshwater eel)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Branchiostoma lanceolatum (Common lancelet)


13 genes

ENSDARG00000095002 TNNC2
ENSDARG00000115350 CR749762.5
118207455 LOC118207455
ENSAMXG00000012883 si:rp71-17i16.4
ENSELUG00000010354 si:rp71-17i16.4
ENSPREG00000003934 si:rp71-17i16.4
ENSACLG00000007485 si:rp71-17i16.4
ENSNBRG00000020563 tnnc2
ENSSMAG00000002506 si:rp71-17i16.4
ENSGACG00000004196 si:rp71-17i16.4
BL08950 TNNC2
BL17579 TNNC2
BL24593 CALM1
Compare expression
Orthology information comes from OMA : ENSORLG00000001761.

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Gnathostomata

1 gene

Compare expression: table | graph

Vertebrata

Compare expression: table | graph

Paralogy information comes from OMA : ENSORLG00000001761.

Cross-references

Ensembl

ENSORLG00000001761 (si:rp71-17i16.4)

ZFIN

ZDB-GENE-090312-215 (si:rp71-17i16.4)

UniProtKB/TrEMBL