Gasterosteus aculeatus

Gene : si:dkey-34d22.5 - ENSGACG00000013998 - Gasterosteus aculeatus (Three-spined stickleback)

General information

Expressed in zone of skin and 3 other cell types or tissues.

Gene identifier

ENSGACG00000013998

Name

si:dkey-34d22.5

Description

si:dkey-34d22.5 [Source:ZFIN;Acc:ZDB-GENE-131121-578]

Synonym(s)

Orthologs

Paralogs

Expression graph

80%

Expression table

80%

Reported absence of expression

80%

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Percomorphaceae

6 species

Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Nothobranchius furzeri (Turquoise killifish)

6 genes

ENSPREG00000004969 si:dkey-34d22.5
ENSORLG00000014099 si:dkey-34d22.5
ENSACLG00000027713 si:dkey-34d22.5
ENSNBRG00000008657 si:dkey-34d22.5
ENSSMAG00000005896 si:dkey-34d22.5
ENSNFUG00015001382 rab42b
Compare expression
Acanthomorphata

7 species

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Nothobranchius furzeri (Turquoise killifish)

7 genes

ENSGMOG00000019230 rab42b
ENSPREG00000004969 si:dkey-34d22.5
ENSORLG00000014099 si:dkey-34d22.5
ENSACLG00000027713 si:dkey-34d22.5
ENSNBRG00000008657 si:dkey-34d22.5
ENSSMAG00000005896 si:dkey-34d22.5
ENSNFUG00015001382 rab42b
Compare expression
Euteleosteomorpha

8 species

Salmo salar (Atlantic salmon)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Nothobranchius furzeri (Turquoise killifish)

8 genes

ENSSSAG00000068537 rab42
ENSGMOG00000019230 rab42b
ENSPREG00000004969 si:dkey-34d22.5
ENSORLG00000014099 si:dkey-34d22.5
ENSACLG00000027713 si:dkey-34d22.5
ENSNBRG00000008657 si:dkey-34d22.5
ENSSMAG00000005896 si:dkey-34d22.5
ENSNFUG00015001382 rab42b
Compare expression
Clupeocephala

9 species

Danio rerio (zebrafish)

Salmo salar (Atlantic salmon)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Nothobranchius furzeri (Turquoise killifish)

10 genes

Compare expression
Teleostei

10 species

Danio rerio (zebrafish)

Anguilla anguilla (European freshwater eel)
Salmo salar (Atlantic salmon)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Nothobranchius furzeri (Turquoise killifish)

11 genes

Compare expression
Neopterygii

11 species

Danio rerio (zebrafish)

Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Salmo salar (Atlantic salmon)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Nothobranchius furzeri (Turquoise killifish)

12 genes

Compare expression
Euteleostomi

17 species

Danio rerio (zebrafish)

Equus caballus (horse)
Gallus gallus (chicken)
Monodelphis domestica (opossum)
Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Salmo salar (Atlantic salmon)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Nothobranchius furzeri (Turquoise killifish)
Latimeria chalumnae (Coelacanth)
Compare expression
Orthology information comes from OMA : ENSGACG00000013998.

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Opisthokonta

83 genes

ENSGACG00000000416 rab21
ENSGACG00000000729 rhebl1
ENSGACG00000000789 rab1ba
ENSGACG00000000807 RAB7A
ENSGACG00000001087
ENSGACG00000001950 RAB39B
ENSGACG00000001952 zgc:162171
ENSGACG00000003615 rab3b
ENSGACG00000003726 rab6ba
ENSGACG00000003864 rab1ab
ENSGACG00000003972 RAB9A
ENSGACG00000004844 rras
ENSGACG00000004965 rab25a
ENSGACG00000004997 rab5aa
ENSGACG00000005397 si:ch211-247i17.1
ENSGACG00000005608 rab22a
ENSGACG00000005979 RAB15
ENSGACG00000006151 rab23
ENSGACG00000006153 rap1ab
ENSGACG00000006162
ENSGACG00000006453 rab3db
ENSGACG00000007169 rab10
ENSGACG00000007201 rab3c
ENSGACG00000007722 rab15
ENSGACG00000007800 rab42a
ENSGACG00000007818 MRAS
ENSGACG00000008046 RAB38
ENSGACG00000008173 RAB3A
ENSGACG00000008659 rab5c
ENSGACG00000009102 rab5b
ENSGACG00000009539 rab4b
ENSGACG00000009647 rab7a
ENSGACG00000010261 rap2b
ENSGACG00000010417 megf8
ENSGACG00000010473 RAB29
ENSGACG00000011272 RAB8A
ENSGACG00000011340 hrasb
ENSGACG00000011607 rab32b
ENSGACG00000011637 rab32a
ENSGACG00000011661 kras
ENSGACG00000011886 rap1aa
ENSGACG00000011925 rab13
ENSGACG00000012006 rab30
ENSGACG00000012896 zgc:55558
ENSGACG00000012989 rab5ab
ENSGACG00000013249 rab25b
ENSGACG00000013259 rab11al
ENSGACG00000013297
ENSGACG00000013401 zgc:171927
ENSGACG00000013548 rab35b
ENSGACG00000013721 rab6bb
ENSGACG00000013851 RAB27B
ENSGACG00000014578 rab9a
ENSGACG00000014905 rab2a
ENSGACG00000014915 si:dkey-16l2.16
ENSGACG00000015009 rap2b
ENSGACG00000015103 rap2ab
ENSGACG00000015233 RAB37
ENSGACG00000015479 rab11bb
ENSGACG00000015513 rab3aa
ENSGACG00000015645 rras2
ENSGACG00000015855 rab27a
ENSGACG00000016164 rab4a
ENSGACG00000016372
ENSGACG00000016662 RAB31
ENSGACG00000016680 rheb
ENSGACG00000016799 RAB14
ENSGACG00000016850 rab8a
ENSGACG00000017018 rap2c
ENSGACG00000017153 rab41
ENSGACG00000017522
ENSGACG00000017755 ran
ENSGACG00000017867 rab27b
ENSGACG00000018291 rab9b
ENSGACG00000018847
ENSGACG00000019134 RERG
ENSGACG00000019452 RAB3D
ENSGACG00000019642 rab1aa
ENSGACG00000020356 rab6a
ENSGACG00000020437 RAB39B
ENSGACG00000020438 rab38c
ENSGACG00000020585 rab38b
ENSGACG00000020797 rab24

Compare expression: table | graph

Paralogy information comes from OMA : ENSGACG00000013998.

Cross-references

Ensembl

ENSGACG00000013998 (si:dkey-34d22.5)

ZFIN

ZDB-GENE-131121-578 (si:dkey-34d22.5)

UniProtKB/TrEMBL