Oryzias latipes

Gene : si:dkey-34d22.5 - ENSORLG00000014099 - Oryzias latipes (Japanese rice fish)

General information

Expressed in pharyngeal gill and 12 other cell types or tissues.

Gene identifier

ENSORLG00000014099

Name

si:dkey-34d22.5

Description

RAB42, member RAS oncogene family [Source:NCBI gene;Acc:101168571]

Synonym(s)

Orthologs

Paralogs

Expression graph

80%

Expression table

80%

Reported absence of expression

80%

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Atherinomorphae

2 species

Poecilia reticulata (Guppy)
Nothobranchius furzeri (Turquoise killifish)

2 genes

Compare expression
Ovalentaria

4 species

Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Nothobranchius furzeri (Turquoise killifish)

4 genes

ENSPREG00000004969 si:dkey-34d22.5
ENSACLG00000027713 si:dkey-34d22.5
ENSNBRG00000008657 si:dkey-34d22.5
ENSNFUG00015001382 rab42b
Compare expression
Percomorphaceae

6 species

Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)

6 genes

ENSPREG00000004969 si:dkey-34d22.5
ENSACLG00000027713 si:dkey-34d22.5
ENSNBRG00000008657 si:dkey-34d22.5
ENSSMAG00000005896 si:dkey-34d22.5
ENSGACG00000013998 si:dkey-34d22.5
ENSNFUG00015001382 rab42b
Compare expression
Acanthomorphata

7 species

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)

7 genes

ENSGMOG00000019230 rab42b
ENSPREG00000004969 si:dkey-34d22.5
ENSACLG00000027713 si:dkey-34d22.5
ENSNBRG00000008657 si:dkey-34d22.5
ENSSMAG00000005896 si:dkey-34d22.5
ENSGACG00000013998 si:dkey-34d22.5
ENSNFUG00015001382 rab42b
Compare expression
Euteleosteomorpha

8 species

Salmo salar (Atlantic salmon)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)

8 genes

ENSSSAG00000068537 rab42
ENSGMOG00000019230 rab42b
ENSPREG00000004969 si:dkey-34d22.5
ENSACLG00000027713 si:dkey-34d22.5
ENSNBRG00000008657 si:dkey-34d22.5
ENSSMAG00000005896 si:dkey-34d22.5
ENSGACG00000013998 si:dkey-34d22.5
ENSNFUG00015001382 rab42b
Compare expression
Clupeocephala

9 species

Danio rerio (zebrafish)

Salmo salar (Atlantic salmon)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)

10 genes

Compare expression
Teleostei

10 species

Danio rerio (zebrafish)

Anguilla anguilla (European freshwater eel)
Salmo salar (Atlantic salmon)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)

11 genes

Compare expression
Neopterygii

11 species

Danio rerio (zebrafish)

Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Salmo salar (Atlantic salmon)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)

12 genes

Compare expression
Euteleostomi

17 species

Danio rerio (zebrafish)

Equus caballus (horse)
Gallus gallus (chicken)
Monodelphis domestica (opossum)
Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Salmo salar (Atlantic salmon)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Latimeria chalumnae (Coelacanth)
Compare expression
Orthology information comes from OMA : ENSORLG00000014099.

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Opisthokonta

57 genes

Compare expression: table | graph

Paralogy information comes from OMA : ENSORLG00000014099.

Cross-references

Ensembl

ENSORLG00000014099 (si:dkey-34d22.5)

ZFIN

ZDB-GENE-131121-578 (si:dkey-34d22.5)

UniProtKB/TrEMBL