Salmo salar

Gene : HMGB1 - ENSSSAG00000070305 - Salmo salar (Atlantic salmon)

General information

Expressed in semen and 24 other cell types or tissues.

Gene identifier

ENSSSAG00000070305

Name

HMGB1

Description

high mobility group-T protein-like [Source:NCBI gene;Acc:106580642]

Synonym(s)

loc106580642

Orthologs

Paralogs

Expression graph

80%

Expression table

80%

Reported absence of expression

80%

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Protacanthopterygii

1 species

Esox lucius (Northern pike)

1 gene

Compare expression
Euteleosteomorpha

8 species

Esox lucius (Northern pike)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Compare expression
Clupeocephala

9 species

Danio rerio (zebrafish)
Esox lucius (Northern pike)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Compare expression
Neopterygii

10 species

Danio rerio (zebrafish)
Lepisosteus oculatus (Spotted gar)
Esox lucius (Northern pike)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Compare expression
Euteleostomi

42 species

Homo sapiens (human)
Mus musculus (mouse)
Danio rerio (zebrafish)
Canis lupus familiaris (dog)
Felis catus (cat)

Equus caballus (horse)


Sus scrofa (pig)
Bos taurus (cattle)

Capra hircus (Goat)

Ovis aries (Sheep)



Oryctolagus cuniculus (rabbit)



Cavia porcellus (guinea pig)


Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)

Cercocebus atys (Sooty mangabey)



Macaca fascicularis (Crab-eating macaque)



Macaca mulatta (macaque)

Macaca nemestrina (Pig-tailed macaque)


Papio anubis (Olive baboon)

Gorilla gorilla (gorilla)


Pan paniscus (bonobo)




Pan troglodytes (chimpanzee)




Microcebus murinus (Gray mouse lemur)

Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)





Monodelphis domestica (opossum)

Xenopus laevis (African clawed frog)


Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)
Esox lucius (Northern pike)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Latimeria chalumnae (Coelacanth)

85 genes

ENSG00000189403 HMGB1
ENSMUSG00000066551 Hmgb1
ENSDARG00000030479 hmgb1b
ENSCAFG00000006597 HMGB1
ENSFCAG00000000200 HMGB1
ENSFCAG00000014767
ENSECAG00000003655
ENSECAG00000005186
ENSECAG00000008439 HMGB1
ENSSSCG00000009327 HMGB1
ENSBTAG00000014862
ENSBTAG00000018103 HMGB1
ENSCHIG00000014987
ENSCHIG00000018473 HMGB1
ENSOARG00000005357
ENSOARG00000011611
ENSOARG00000011916
ENSOARG00000017078 LOC101111388
ENSOCUG00000004133
ENSOCUG00000021335 HMGB1
ENSOCUG00000022728
ENSOCUG00000024061 HMGB1
ENSCPOG00000000167
ENSCPOG00000007538
ENSCPOG00000031835 HMGB1
ENSGALG00000042875 HMGB1
ENSMGAG00000015087 HMGB1
ENSOANG00000014719 HMGB1
ENSCJAG00000020439 HMGB1
ENSCJAG00000043117
ENSCATG00000003423
ENSCATG00000017216 HMGB1
ENSCATG00000024661
ENSCATG00000042173
ENSMFAG00000000311
ENSMFAG00000001923
ENSMFAG00000030905 HMGB1
ENSMFAG00000040049
ENSMMUG00000019832
ENSMMUG00000046615 HMGB1
ENSMNEG00000028891 HMGB1
ENSMNEG00000029589
ENSMNEG00000030183
ENSPANG00000007200 HMGB1
ENSPANG00000011105
ENSGGOG00000007804
ENSGGOG00000026764 HMGB1
ENSGGOG00000042317
ENSPPAG00000012676
ENSPPAG00000021871
ENSPPAG00000028336
ENSPPAG00000030148 HMGB1
ENSPPAG00000039433
ENSPTRG00000044893 LOC107970066
ENSPTRG00000047359
ENSPTRG00000048008 HMGB1
ENSPTRG00000048984
ENSPTRG00000050599
ENSMICG00000006213
ENSMICG00000007144 HMGB1
ENSCSAG00000018600
108386102 HMGB1
ENSRNOG00000029813 AABR07035218.1
ENSRNOG00000030351 AABR07006627.1
ENSRNOG00000032420 AC108595.1
ENSRNOG00000038478 AABR07029613.1
ENSRNOG00000051482 Hmg1l1
ENSRNOG00000058908 Hmgb1
ENSMODG00000004443
ENSMODG00000009238 HMGB1
108700261 LOC108700261
108709952 HMG-1
380530 hmgb1.L
ENSXETG00000019166 hmgb1
ENSACAG00000005092 HMGB1
ENSLOCG00000000187 hmgb1b
ENSELUG00000007158 hmgb1b
ENSPREG00000012015 hmgb1b
ENSORLG00000003951 hmgb1b
ENSACLG00000000621 hmgb1b
ENSNBRG00000023628 hmgb1b
ENSSMAG00000006047 hmgb1b
ENSGACG00000011447 hmgb1b
ENSNFUG00015002796 HMGB1B
ENSLACG00000006701 HMGB1
Compare expression
Chordata

43 species

Homo sapiens (human)
Mus musculus (mouse)
Danio rerio (zebrafish)
Canis lupus familiaris (dog)
Felis catus (cat)

Equus caballus (horse)


Sus scrofa (pig)
Bos taurus (cattle)

Capra hircus (Goat)

Ovis aries (Sheep)



Oryctolagus cuniculus (rabbit)



Cavia porcellus (guinea pig)


Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)

Cercocebus atys (Sooty mangabey)



Macaca fascicularis (Crab-eating macaque)



Macaca mulatta (macaque)

Macaca nemestrina (Pig-tailed macaque)


Papio anubis (Olive baboon)

Gorilla gorilla (gorilla)


Pan paniscus (bonobo)




Pan troglodytes (chimpanzee)




Microcebus murinus (Gray mouse lemur)

Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)





Monodelphis domestica (opossum)

Xenopus laevis (African clawed frog)


Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)
Esox lucius (Northern pike)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Branchiostoma lanceolatum (Common lancelet)
Latimeria chalumnae (Coelacanth)

86 genes

ENSG00000189403 HMGB1
ENSMUSG00000066551 Hmgb1
ENSDARG00000030479 hmgb1b
ENSCAFG00000006597 HMGB1
ENSFCAG00000000200 HMGB1
ENSFCAG00000014767
ENSECAG00000003655
ENSECAG00000005186
ENSECAG00000008439 HMGB1
ENSSSCG00000009327 HMGB1
ENSBTAG00000014862
ENSBTAG00000018103 HMGB1
ENSCHIG00000014987
ENSCHIG00000018473 HMGB1
ENSOARG00000005357
ENSOARG00000011611
ENSOARG00000011916
ENSOARG00000017078 LOC101111388
ENSOCUG00000004133
ENSOCUG00000021335 HMGB1
ENSOCUG00000022728
ENSOCUG00000024061 HMGB1
ENSCPOG00000000167
ENSCPOG00000007538
ENSCPOG00000031835 HMGB1
ENSGALG00000042875 HMGB1
ENSMGAG00000015087 HMGB1
ENSOANG00000014719 HMGB1
ENSCJAG00000020439 HMGB1
ENSCJAG00000043117
ENSCATG00000003423
ENSCATG00000017216 HMGB1
ENSCATG00000024661
ENSCATG00000042173
ENSMFAG00000000311
ENSMFAG00000001923
ENSMFAG00000030905 HMGB1
ENSMFAG00000040049
ENSMMUG00000019832
ENSMMUG00000046615 HMGB1
ENSMNEG00000028891 HMGB1
ENSMNEG00000029589
ENSMNEG00000030183
ENSPANG00000007200 HMGB1
ENSPANG00000011105
ENSGGOG00000007804
ENSGGOG00000026764 HMGB1
ENSGGOG00000042317
ENSPPAG00000012676
ENSPPAG00000021871
ENSPPAG00000028336
ENSPPAG00000030148 HMGB1
ENSPPAG00000039433
ENSPTRG00000044893 LOC107970066
ENSPTRG00000047359
ENSPTRG00000048008 HMGB1
ENSPTRG00000048984
ENSPTRG00000050599
ENSMICG00000006213
ENSMICG00000007144 HMGB1
ENSCSAG00000018600
108386102 HMGB1
ENSRNOG00000029813 AABR07035218.1
ENSRNOG00000030351 AABR07006627.1
ENSRNOG00000032420 AC108595.1
ENSRNOG00000038478 AABR07029613.1
ENSRNOG00000051482 Hmg1l1
ENSRNOG00000058908 Hmgb1
ENSMODG00000004443
ENSMODG00000009238 HMGB1
108700261 LOC108700261
108709952 HMG-1
380530 hmgb1.L
ENSXETG00000019166 hmgb1
ENSACAG00000005092 HMGB1
ENSLOCG00000000187 hmgb1b
ENSELUG00000007158 hmgb1b
ENSPREG00000012015 hmgb1b
ENSORLG00000003951 hmgb1b
ENSACLG00000000621 hmgb1b
ENSNBRG00000023628 hmgb1b
ENSSMAG00000006047 hmgb1b
ENSGACG00000011447 hmgb1b
ENSNFUG00015002796 HMGB1B
BL11411 HMGB1
ENSLACG00000006701 HMGB1
Compare expression
Bilateria

44 species

Homo sapiens (human)
Mus musculus (mouse)
Danio rerio (zebrafish)
Caenorhabditis elegans (nematode)
Canis lupus familiaris (dog)
Felis catus (cat)

Equus caballus (horse)


Sus scrofa (pig)
Bos taurus (cattle)

Capra hircus (Goat)

Ovis aries (Sheep)



Oryctolagus cuniculus (rabbit)



Cavia porcellus (guinea pig)


Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)

Cercocebus atys (Sooty mangabey)



Macaca fascicularis (Crab-eating macaque)



Macaca mulatta (macaque)

Macaca nemestrina (Pig-tailed macaque)


Papio anubis (Olive baboon)

Gorilla gorilla (gorilla)


Pan paniscus (bonobo)




Pan troglodytes (chimpanzee)




Microcebus murinus (Gray mouse lemur)

Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)





Monodelphis domestica (opossum)

Xenopus laevis (African clawed frog)


Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)
Esox lucius (Northern pike)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Branchiostoma lanceolatum (Common lancelet)
Latimeria chalumnae (Coelacanth)

87 genes

ENSG00000189403 HMGB1
ENSMUSG00000066551 Hmgb1
ENSDARG00000030479 hmgb1b
WBGene00001972 hmg-1.2
ENSCAFG00000006597 HMGB1
ENSFCAG00000000200 HMGB1
ENSFCAG00000014767
ENSECAG00000003655
ENSECAG00000005186
ENSECAG00000008439 HMGB1
ENSSSCG00000009327 HMGB1
ENSBTAG00000014862
ENSBTAG00000018103 HMGB1
ENSCHIG00000014987
ENSCHIG00000018473 HMGB1
ENSOARG00000005357
ENSOARG00000011611
ENSOARG00000011916
ENSOARG00000017078 LOC101111388
ENSOCUG00000004133
ENSOCUG00000021335 HMGB1
ENSOCUG00000022728
ENSOCUG00000024061 HMGB1
ENSCPOG00000000167
ENSCPOG00000007538
ENSCPOG00000031835 HMGB1
ENSGALG00000042875 HMGB1
ENSMGAG00000015087 HMGB1
ENSOANG00000014719 HMGB1
ENSCJAG00000020439 HMGB1
ENSCJAG00000043117
ENSCATG00000003423
ENSCATG00000017216 HMGB1
ENSCATG00000024661
ENSCATG00000042173
ENSMFAG00000000311
ENSMFAG00000001923
ENSMFAG00000030905 HMGB1
ENSMFAG00000040049
ENSMMUG00000019832
ENSMMUG00000046615 HMGB1
ENSMNEG00000028891 HMGB1
ENSMNEG00000029589
ENSMNEG00000030183
ENSPANG00000007200 HMGB1
ENSPANG00000011105
ENSGGOG00000007804
ENSGGOG00000026764 HMGB1
ENSGGOG00000042317
ENSPPAG00000012676
ENSPPAG00000021871
ENSPPAG00000028336
ENSPPAG00000030148 HMGB1
ENSPPAG00000039433
ENSPTRG00000044893 LOC107970066
ENSPTRG00000047359
ENSPTRG00000048008 HMGB1
ENSPTRG00000048984
ENSPTRG00000050599
ENSMICG00000006213
ENSMICG00000007144 HMGB1
ENSCSAG00000018600
108386102 HMGB1
ENSRNOG00000029813 AABR07035218.1
ENSRNOG00000030351 AABR07006627.1
ENSRNOG00000032420 AC108595.1
ENSRNOG00000038478 AABR07029613.1
ENSRNOG00000051482 Hmg1l1
ENSRNOG00000058908 Hmgb1
ENSMODG00000004443
ENSMODG00000009238 HMGB1
108700261 LOC108700261
108709952 HMG-1
380530 hmgb1.L
ENSXETG00000019166 hmgb1
ENSACAG00000005092 HMGB1
ENSLOCG00000000187 hmgb1b
ENSELUG00000007158 hmgb1b
ENSPREG00000012015 hmgb1b
ENSORLG00000003951 hmgb1b
ENSACLG00000000621 hmgb1b
ENSNBRG00000023628 hmgb1b
ENSSMAG00000006047 hmgb1b
ENSGACG00000011447 hmgb1b
ENSNFUG00015002796 HMGB1B
BL11411 HMGB1
ENSLACG00000006701 HMGB1
Compare expression
Orthology information comes from OMA : ENSSSAG00000070305.

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Salmo

1 gene

Compare expression: table | graph

Teleostei

Compare expression: table | graph

Vertebrata

Compare expression: table | graph

Chordata

Compare expression: table | graph

Paralogy information comes from OMA : ENSSSAG00000070305.

Cross-references

Ensembl

UniProtKB/TrEMBL